RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TLL1O43897 1013 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 MYOGP15173 224 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 RPL13P26373 211 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 WNT7BP56706 349 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 FKBP3Q00688 224 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 SNRNP35Q16560 246 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 ABI1Q8IZP0 508 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 SNX27Q96L92 541 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 TMEM117Q9H0C3 514 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 DNAJC25Q9H1X3 360 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 RPF1Q9H9Y2 349 aaKnown RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
SMN1-202ENST00000380707 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 PLAGL2Q9UPG8 496 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 INSL6Q9Y581 213 aa13.78□□□□□ -0.2
SMN1-202ENST00000380707 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 ZNF233A6NK53 670 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 INPPL1O15357 1258 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 AKAP3O75969 853 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 POMCP01189 267 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 ADRB2P07550 413 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 ERCC5P28715 1186 aaPredicted RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 PBX2P40425 430 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 SCNN1GP51170 649 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 SPAG1Q07617 926 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 FOXR2Q6PJQ5 311 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 KIAA1586Q9HCI6 787 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 RBAKQ9NYW8 714 aaPredicted RBP13.77□□□□□ -0.21
SMN1-202ENST00000380707 CNTN3Q9P232 1028 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 HCSTQ9UBK5 93 aa13.77□□□□□ -0.21
SMN1-202ENST00000380707 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 A0A1W2PPC1 479 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 CETN3O15182 167 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
SMN1-202ENST00000380707 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
SMN1-202ENST00000380707 ANO6Q4KMQ2 910 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 GLRA4Q5JXX5 417 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 BRSK2Q8IWQ3 736 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 PBX4Q9BYU1 374 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
SMN1-202ENST00000380707 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
SMN1-202ENST00000380707 TULP1O00294 542 aaPredicted RBP13.75□□□□□ -0.21
SMN1-202ENST00000380707 B4GALT3O60512 393 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 KCNE1P15382 129 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 NAB2Q15742 525 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
SMN1-202ENST00000380707 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 PPP1R10Q96QC0 940 aaKnown RBP13.75□□□□□ -0.21
SMN1-202ENST00000380707 RPS6KC1Q96S38 1066 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 SRRTQ9BXP5 876 aaKnown RBP13.75□□□□□ -0.21
SMN1-202ENST00000380707 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
SMN1-202ENST00000380707 PCDHA11Q9Y5I1 949 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 TRIP11Q15643 1979 aa13.75□□□□□ -0.21
SMN1-202ENST00000380707 DDHD2O94830 711 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 ARHGEF15O94989 841 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 IL18RAPO95256 599 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 THP07101 528 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 CA3P07451 260 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 NFICP08651 508 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 PSMC2P35998 433 aaKnown RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 LRIT3Q3SXY7 679 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 JADE1Q6IE81 842 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 CD302Q8IX05 232 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 FAM186BQ8IYM0 893 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 TMEM130Q8N3G9 435 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 C18orf25Q96B23 403 aaPredicted RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 ASB7Q9H672 318 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 CWH43Q9H720 699 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 KANSL3Q9P2N6 904 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 MRPL42Q9Y6G3 142 aaKnown RBP13.74□□□□□ -0.21
SMN1-202ENST00000380707 CITO14578 2027 aa13.74□□□□□ -0.21
SMN1-202ENST00000380707 MAPK13O15264 365 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms