RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 CCDC105Q8IYK2 499 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 UVRAGQ9P2Y5 699 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 GABBR1Q9UBS5 961 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 GGA2Q9UJY4 613 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 LCTP09848 1927 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 TLDC2A0PJX2 215 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 STBD1O95210 358 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 KCNA3P22001 575 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 CLEC16AQ2KHT3 1053 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 ATG4CQ96DT6 458 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 CEP170P1Q96L14 293 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 TRIM7Q9C029 511 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 SIP14410 1827 aa20.91■□□□□ 0.94
SHROOM1-202ENST00000378676 C5orf60A6NFR6 353 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 CLDN3O15551 220 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 KRT5P13647 590 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 DPEP1P16444 411 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 RWDD2BP57060 319 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 BAATQ14032 418 aaPredicted RBP20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 C12orf50Q8NA57 414 aaPredicted RBP20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 EPS8L3Q8TE67 593 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 MTUS1Q9ULD2 1270 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 KCNV1Q6PIU1 500 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 TAS1R3Q7RTX0 852 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 CNPY4Q8N129 248 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 C3orf20Q8ND61 904 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 SPIRE2Q8WWL2 714 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 ART4Q93070 314 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 PGM2Q96G03 612 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 CNOT10Q9H9A5 744 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 XPNPEP1Q9NQW7 623 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 RNF146Q9NTX7 359 aa20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 MTRF1LQ9UGC7 380 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-202ENST00000378676 IFI35P80217 286 aaPredicted RBP20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 SPRED3Q2MJR0 410 aa20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 LMBRD2Q68DH5 695 aaPredicted RBP20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 XPO6Q96QU8 1125 aaKnown RBP20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 SELENOSQ9BQE4 189 aa20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 HERPUD2Q9BSE4 406 aa20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 PCDHA10Q9Y5I2 948 aa20.89■□□□□ 0.94
SHROOM1-202ENST00000378676 HNRNPDLO14979 420 aaKnown RBP20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 CHN1P15882 459 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 DRD4P21917 467 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 GBP1P32455 592 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 ERMARDQ5T6L9 678 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 PHLDB2Q86SQ0 1253 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 NLRX1Q86UT6 975 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 GPD1LQ8N335 351 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 SAMD3Q8N6K7 520 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 C1orf54Q8WWF1 131 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 KIFAP3Q92845 792 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 SEC16BQ96JE7 1060 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 FAM213AQ9BRX8 229 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 FAM129AQ9BZQ8 928 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 PARP2Q9UGN5 583 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 ANAPC7Q9UJX3 599 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 MROH7Q68CQ1 1323 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 PASKQ96RG2 1323 aa20.89■□□□□ 0.93
SHROOM1-202ENST00000378676 VWA5AO00534 786 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 RIPK2O43353 540 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 SORBS3O60504 671 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 ZBED4O75132 1171 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 WNT7BP56706 349 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 ZNF516Q92618 1163 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 NTPCRQ9BSD7 190 aaKnown RBP20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 KCNA2P16389 499 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 GTF2H1P32780 548 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 MMP13P45452 471 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 SP4Q02446 784 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 VSIG10LQ86VR7 867 aa20.88■□□□□ 0.93
SHROOM1-202ENST00000378676 TP73O15350 636 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 RGS16O15492 202 aaPredicted RBP20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 RGS20O76081 388 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 ECEL1O95672 775 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 NR3C2P08235 984 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 UNGP13051 313 aaPredicted RBP20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 CCND2P30279 289 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 SLCO1A2P46721 670 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 C2CD6Q53TS8 623 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 MMS22LQ6ZRQ5 1243 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 RDM1Q8NG50 284 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 ATXN2LQ8WWM7 1075 aaKnown RBP20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 SENP7Q9BQF6 1050 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 LRRC19Q9H756 370 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 MYPNQ86TC9 1320 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 FSCN2O14926 492 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 MAPK4P31152 587 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 KRT17Q04695 432 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 SNX1Q13596 522 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 CYFIP1Q7L576 1253 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 CCDC25Q86WR0 208 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 ATG4AQ8WYN0 398 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 OSBPL7Q9BZF2 842 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 PDLIM7Q9NR12 457 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 CHST7Q9NS84 486 aa20.87■□□□□ 0.93
SHROOM1-202ENST00000378676 SEPT9Q9UHD8 586 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms