RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 SNX27Q96L92 541 aa22.42■■□□□ 1.18
TRIM13-203ENST00000378183 ZMAT2Q96NC0 199 aaKnown RBP22.42■■□□□ 1.18
TRIM13-203ENST00000378183 PPP1R10Q96QC0 940 aaKnown RBP22.42■■□□□ 1.18
TRIM13-203ENST00000378183 VN1R3Q9BXE9 311 aa22.42■■□□□ 1.18
TRIM13-203ENST00000378183 NSUN3Q9H649 340 aaKnown RBP22.42■■□□□ 1.18
TRIM13-203ENST00000378183 PRDM6Q9NQX0 595 aa22.42■■□□□ 1.18
TRIM13-203ENST00000378183 TLR9Q9NR96 1032 aa22.42■■□□□ 1.18
TRIM13-203ENST00000378183 SMIM28A0A1B0GU29 152 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 OGTO15294 1046 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 GADD45BO75293 160 aaPredicted RBP22.41■■□□□ 1.18
TRIM13-203ENST00000378183 OR1G1P47890 313 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 YARSP54577 528 aaKnown RBP22.41■■□□□ 1.18
TRIM13-203ENST00000378183 KRT17Q04695 432 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 TUSC3Q13454 348 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 TIGD5Q53EQ6 642 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 TCEAL5Q5H9L2 206 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 RABGGTAQ92696 567 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 TMEM169Q96HH4 297 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 IPO9Q96P70 1041 aaKnown RBP22.41■■□□□ 1.18
TRIM13-203ENST00000378183 PAAF1Q9BRP4 392 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 MSTO1Q9BUK6 570 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 TOPORSQ9NS56 1045 aaPredicted RBP22.41■■□□□ 1.18
TRIM13-203ENST00000378183 EXOC7Q9UPT5 735 aa22.41■■□□□ 1.18
TRIM13-203ENST00000378183 PRG3Q9Y2Y8 225 aaPredicted RBP22.41■■□□□ 1.18
TRIM13-203ENST00000378183 CARNS1A5YM72 827 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 EFEMP2O95967 443 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 MYL1P05976 194 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 CXCL8P10145 99 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 KMT5BQ4FZB7 885 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 SLFN12LQ6IEE8 588 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 ADGRD2Q7Z7M1 963 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 DDX53Q86TM3 631 aaKnown RBP22.4■■□□□ 1.18
TRIM13-203ENST00000378183 TMEM87AQ8NBN3 555 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 ZNF507Q8TCN5 953 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 SLC39A2Q9NP94 309 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 CNTN3Q9P232 1028 aa22.4■■□□□ 1.18
TRIM13-203ENST00000378183 PUF60Q9UHX1 559 aaKnown RBP22.4■■□□□ 1.18
TRIM13-203ENST00000378183 CASTOR2A6NHX0 329 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 EIF3DO15371 548 aaKnown RBP eCLIP22.39■■□□□ 1.17
TRIM13-203ENST00000378183 CLTAP09496 248 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 KCNE1P15382 129 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 SOX4Q06945 474 aaPredicted RBP22.39■■□□□ 1.17
TRIM13-203ENST00000378183 DPYDQ12882 1025 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 SCFD1Q8WVM8 642 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 TMEM206Q9H813 350 aa22.39■■□□□ 1.17
TRIM13-203ENST00000378183 CPSF3Q9UKF6 684 aaKnown RBP22.39■■□□□ 1.17
TRIM13-203ENST00000378183 TTC26A0AVF1 554 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 RPN1P04843 607 aaKnown RBP22.38■■□□□ 1.17
TRIM13-203ENST00000378183 FAM160A1Q05DH4 1040 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 STK4Q13043 487 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 ENOX2Q16206 610 aaKnown RBP22.38■■□□□ 1.17
TRIM13-203ENST00000378183 SYCP3Q8IZU3 236 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 VPS52Q8N1B4 723 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 ZSWIM2Q8NEG5 633 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 POMGNT1Q8WZA1 660 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 TCF25Q9BQ70 676 aa22.38■■□□□ 1.17
TRIM13-203ENST00000378183 AGO2Q9UKV8 859 aaKnown RBP22.38■■□□□ 1.17
TRIM13-203ENST00000378183 ADRB2P07550 413 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 IGFBP6P24592 240 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-203ENST00000378183 GTF2F1P35269 517 aaKnown RBP eCLIP22.37■■□□□ 1.174e-7■■□□□ 11.9
TRIM13-203ENST00000378183 ACOT2P49753 483 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 HYAL1Q12794 435 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 KYAT1Q16773 422 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 PLPP4Q5VZY2 271 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 CRELD2Q6UXH1 353 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-203ENST00000378183 STXBP4Q6ZWJ1 553 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 TAS1R1Q7RTX1 841 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 RNF168Q8IYW5 571 aaPredicted RBP22.37■■□□□ 1.17
TRIM13-203ENST00000378183 KIAA0895Q8NCT3 520 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 MICAL1Q8TDZ2 1067 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 COLEC11Q9BWP8 271 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 ZBP1Q9H171 429 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 PLEKHA5Q9HAU0 1116 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 GOLGA2P5Q9HBQ8 144 aa22.37■■□□□ 1.17
TRIM13-203ENST00000378183 HIDE1A8MVS5 230 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 LACTBL1A8MY62 500 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 TGFB1I1O43294 461 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 NR1I2O75469 434 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 GARTP22102 1010 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 SPAG1Q07617 926 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 HSP90AA2PQ14568 343 aaPredicted RBP22.36■■□□□ 1.17
TRIM13-203ENST00000378183 POSTNQ15063 836 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 SKIV2LQ15477 1246 aaKnown RBP22.36■■□□□ 1.17
TRIM13-203ENST00000378183 BMT2Q1RMZ1 405 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 PDE12Q6L8Q7 609 aaKnown RBP22.36■■□□□ 1.17
TRIM13-203ENST00000378183 CD300LGQ6UXG3 332 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 TMC7Q7Z402 723 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 TMEM130Q8N3G9 435 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 C18orf25Q96B23 403 aaPredicted RBP22.36■■□□□ 1.17
TRIM13-203ENST00000378183 CBWD1Q9BRT8 395 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 RPF1Q9H9Y2 349 aaKnown RBP22.36■■□□□ 1.17
TRIM13-203ENST00000378183 ENTPD7Q9NQZ7 604 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 EXOC1Q9NV70 894 aa22.36■■□□□ 1.17
TRIM13-203ENST00000378183 UBE4BO95155 1302 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 KIF4AO95239 1232 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 CTSAP10619 480 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 CLCNKBP51801 687 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 PSMD2Q13200 908 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 COL19A1Q14993 1142 aa22.35■■□□□ 1.17
TRIM13-203ENST00000378183 ZBTB6Q15916 424 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms