RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 EPC2Q52LR7 807 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 LRRC55Q6ZSA7 311 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 MICALL1Q8N3F8 863 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 EHBP1Q8NDI1 1231 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 ZNF507Q8TCN5 953 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 STAMQ92783 540 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 NACC1Q96RE7 527 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 C7orf25Q9BPX7 421 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 GBP3Q9H0R5 595 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 VPS16Q9H269 839 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 HAUS4Q9H6D7 363 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
VRK3-202ENST00000377011 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 DGAT1O75907 488 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 MBTD1Q05BQ5 628 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 GPS2Q13227 327 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 FIGNQ5HY92 759 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 ZNF410Q86VK4 478 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 ECHDC2Q86YB7 292 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 DAW1Q8N136 415 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CPB2Q96IY4 423 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 TGS1Q96RS0 853 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 PLXNA4Q9HCM2 1894 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 B4GALT3O60512 393 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 NDUFA10O95299 355 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CYP11B2P19099 503 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CCNE1P24864 410 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 DNAJB1P25685 340 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 PBX3P40426 434 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 PTENP60484 403 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 KRT83P78385 493 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CDK17Q00537 523 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 BTG3Q14201 252 aaPredicted RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 MEA1Q16626 185 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 FOXR2Q6PJQ5 311 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 CATSPER4Q7RTX7 472 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 RASSF8Q8NHQ8 419 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 EIF2AQ9BY44 585 aaKnown RBP13.47□□□□□ -0.25
VRK3-202ENST00000377011 FUT8Q9BYC5 575 aa13.47□□□□□ -0.25
VRK3-202ENST00000377011 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 A0A1W2PQJ5 194 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 ARHGEF35A5YM69 484 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 TBKBP1A7MCY6 615 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 MAP2K7O14733 419 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 TSPAN1O60635 241 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 MAPK7Q13164 816 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 CAMK1Q14012 370 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 TMEM119Q4V9L6 283 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 CABP7Q86V35 215 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 TMEM192Q8IY95 271 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 CCDC170Q8IYT3 715 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 ACRBPQ8NEB7 543 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 AGPAT5Q9NUQ2 364 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 PPME1Q9Y570 386 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 PCDHB7Q9Y5E2 793 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
VRK3-202ENST00000377011 A0A0U1RQF3 1178 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 GRM6O15303 877 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 MCM3P25205 808 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 PHKA2P46019 1235 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 AMPD2Q01433 879 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 LONRF2Q1L5Z9 754 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 HYIQ5T013 277 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
VRK3-202ENST00000377011 P2RX5Q93086 422 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 GAS2L1Q99501 681 aaPredicted RBP13.45□□□□□ -0.26
VRK3-202ENST00000377011 JPH2Q9BR39 696 aaPredicted RBP13.45□□□□□ -0.26
VRK3-202ENST00000377011 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
VRK3-202ENST00000377011 CXCL16Q9H2A7 254 aa13.45□□□□□ -0.26
VRK3-202ENST00000377011 CWH43Q9H720 699 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms