RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 PDZD7Q9H5P4 517 aa8.44□□□□□ -1.06
SSX9-201ENST00000376909 MMRN2Q9H8L6 949 aa8.44□□□□□ -1.06
SSX9-201ENST00000376909 TRMT13Q9NUP7 481 aaKnown RBP8.44□□□□□ -1.06
SSX9-201ENST00000376909 RBAKQ9NYW8 714 aaPredicted RBP8.44□□□□□ -1.06
SSX9-201ENST00000376909 SIK3Q9Y2K2 1263 aa8.44□□□□□ -1.06
SSX9-201ENST00000376909 CDY2AQ9Y6F7 541 aa8.44□□□□□ -1.06
SSX9-201ENST00000376909 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 GTPBP10A4D1E9 387 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 LRRIQ3A6PVS8 624 aaPredicted RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 P4HA2O15460 535 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 TFRCP02786 760 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 GYPCP04921 128 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 DLATP10515 647 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 TRIM21P19474 475 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 AXLP30530 894 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 THPOP40225 353 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 GCLMP48507 274 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 KLK7P49862 253 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 DLG4P78352 724 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 MYL7Q01449 175 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 KCNC4Q03721 635 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 PPP3CAQ08209 521 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 ARID5BQ14865 1188 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 SURF1Q15526 300 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 KYAT1Q16773 422 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 EXOC3L4Q17RC7 722 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 FIGNQ5HY92 759 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 ZBTB41Q5SVQ8 909 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 C1orf220Q5T0J3 134 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 NOTUMQ6P988 496 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 CDR2LQ86X02 465 aaPredicted RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 CNGA4Q8IV77 575 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 BRSK2Q8IWQ3 736 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 LRRC8AQ8IWT6 810 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 THNSL1Q8IYQ7 743 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 ZNF397Q8NF99 534 aaPredicted RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 NEK11Q8NG66 645 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 PARD3BQ8TEW8 1205 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 CPLX3Q8WVH0 158 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 WNT8BQ93098 351 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 ARMC5Q96C12 935 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 ZNF333Q96JL9 665 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 FNBP1Q96RU3 617 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 CRACR2AQ9BSW2 395 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 LSM14BQ9BX40 385 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 SENP6Q9GZR1 1112 aaPredicted RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
SSX9-201ENST00000376909 CAPN11Q9UMQ6 739 aa8.43□□□□□ -1.06
SSX9-201ENST00000376909 MYH11P35749 1972 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 A0A1W2PQJ5 194 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 TTC26A0AVF1 554 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 PMM2O15305 246 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 NRDCO43847 1150 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 FAM189A1O60320 539 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 MFAP3LO75121 409 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CAND2O75155 1236 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 RPS6KA5O75582 802 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 IL18RAPO95256 599 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 SGPL1O95470 568 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CHRNA1P02708 482 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CLTAP09496 248 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CTSHP09668 335 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 STAG3L1P0CL83 205 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 TNNI1P19237 187 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 SLC9A1P19634 815 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 PON1P27169 355 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 HOXA11P31270 313 aaPredicted RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 CASP14P31944 242 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 TNFSF9P41273 254 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 MXI1P50539 228 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CDK7P50613 346 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 FXR1P51114 621 aaKnown RBP eCLIP8.42□□□□□ -1.06
SSX9-201ENST00000376909 ADKP55263 362 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 CLDN10P78369 228 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 POU5F1Q01860 360 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 GOLGA8FQ08AF8 430 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 MGAT3Q09327 533 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 GOLGA8DPQ0D2H9 430 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 DCAF4L1Q3SXM0 396 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CBWD6Q4V339 395 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 SEZ6Q53EL9 994 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CBWD3Q5JTY5 395 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 FAM26DQ5JW98 314 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 CBWD5Q5RIA9 395 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 KRT39Q6A163 491 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 SLC27A1Q6PCB7 646 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 FAM228AQ86W67 206 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 TC2NQ8N9U0 490 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 U2AF1L4Q8WU68 220 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 CACTINQ8WUQ7 758 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 TMEM40Q8WWA1 233 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 DHX38Q92620 1227 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 CCDC51Q96ER9 411 aa8.42□□□□□ -1.06
SSX9-201ENST00000376909 ZNF830Q96NB3 372 aaPredicted RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 POP1Q99575 1024 aaKnown RBP8.42□□□□□ -1.06
SSX9-201ENST00000376909 EDEM3Q9BZQ6 932 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms