RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 DRC3Q9H069 523 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 MAGED2Q9UNF1 606 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 PPP1R3GB7ZBB8 358 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 MYO1CO00159 1063 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 ROR1Q01973 937 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 LAMB3Q13751 1172 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 NAA30Q147X3 362 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 LRRC1Q9BTT6 524 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 COL14A1Q05707 1796 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 TAC1P20366 129 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 SLC26A2P50443 739 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 VSNL1P62760 191 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 HAUS6Q7Z4H7 955 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 SLC35G2Q8TBE7 412 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 ZFP69BQ9UJL9 534 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 PPME1Q9Y570 386 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 KIF13AQ9H1H9 1805 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 MYMKA6NI61 221 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 GPS1Q13098 491 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 MAPRE1Q15691 268 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 ZNF394Q53GI3 561 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 SCN4BQ8IWT1 228 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 SOCS4Q8WXH5 440 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 TGS1Q96RS0 853 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 TMEM51Q9NW97 253 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 AGO2Q9UKV8 859 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 M0QYV0 167 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 PHF2O75151 1096 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 GYPCP04921 128 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 HSPBP1Q9NZL4 362 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 FBXL5Q9UKA1 691 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 SPECC1L-ADORA2AF8WAN1 911 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 SMIM24O75264 130 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 BFSP2Q13515 415 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 PDZD8Q8NEN9 1154 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 HPS3Q969F9 1004 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 SUCLA2Q9P2R7 463 aaPredicted RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 FRMD3A2A2Y4 597 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 NDUFB10O96000 172 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 TRIM49P0CI25 452 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 TRIM49CP0CI26 452 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 GYS1P13807 737 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 FMO5P49326 533 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 TMPRSS15P98073 1019 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 ZNF746Q6NUN9 644 aaPredicted RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 RAB42Q8N4Z0 105 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 SENP2Q9HC62 589 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 AGPAT5Q9NUQ2 364 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 CXCL11O14625 94 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 MX2P20592 715 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 FXR1P51114 621 aaKnown RBP eCLIP11.62□□□□□ -0.55
MDC1-201ENST00000376406 NAB2Q15742 525 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 RASIP1Q5U651 963 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 TTC17Q96AE7 1141 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 ORC6Q9Y5N6 252 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 PSMC1P62191 440 aaKnown RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 AFG1LQ8WV93 481 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 CHMP6Q96FZ7 201 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 MS4A14Q96JA4 679 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 PRMT7Q9NVM4 692 aaPredicted RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 TAF6LQ9Y6J9 622 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 HSPA4LO95757 839 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 RASA1P20936 1047 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 PPP6R3Q5H9R7 873 aaPredicted RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 MMS22LQ6ZRQ5 1243 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
MDC1-201ENST00000376406 TRIM59Q8IWR1 403 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 SPDL1Q96EA4 605 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 RIT2Q99578 217 aa11.62□□□□□ -0.55
MDC1-201ENST00000376406 A0A0G2JND7 137 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 GOLGA8MH3BSY2 632 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 MUTP22033 750 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 PCSK1P29120 753 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 NMT1P30419 496 aaKnown RBP11.61□□□□□ -0.55
MDC1-201ENST00000376406 NYAP1Q6ZVC0 841 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 TBC1D1Q86TI0 1168 aaPredicted RBP11.61□□□□□ -0.55
MDC1-201ENST00000376406 VPS39Q96JC1 886 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 RBM43Q6ZSC3 357 aaKnown RBP11.61□□□□□ -0.55
MDC1-201ENST00000376406 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
MDC1-201ENST00000376406 PPWD1Q96BP3 646 aaKnown RBP11.61□□□□□ -0.55
MDC1-201ENST00000376406 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 UCHL3P15374 230 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 RCOR2Q8IZ40 523 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 EHD4Q9H223 541 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 UVRAGQ9P2Y5 699 aa11.61□□□□□ -0.55
MDC1-201ENST00000376406 TRIM33Q9UPN9 1127 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms