RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GTF2H1P32780 548 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 NF2P35240 595 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 CEP85LQ5SZL2 805 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 WLSQ5T9L3 541 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 RHOT2Q8IXI1 618 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 MYCBPAPQ8TBZ2 947 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 TATDN2Q93075 761 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 FAM84AQ96KN4 292 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 CALR3Q96L12 384 aaKnown RBP15.01□□□□□ -0.01
MSH5-202ENST00000375740 NT5C1BQ96P26 610 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 ATXN2Q99700 1313 aaKnown RBP15.01□□□□□ -0.01
MSH5-202ENST00000375740 ADM5C9JUS6 153 aa15□□□□□ -0.01
MSH5-202ENST00000375740 OATP04181 439 aa15□□□□□ -0.01
MSH5-202ENST00000375740 GPC5P78333 572 aa15□□□□□ -0.01
MSH5-202ENST00000375740 PAK2Q13177 524 aa15□□□□□ -0.01
MSH5-202ENST00000375740 E2F5Q15329 346 aa15□□□□□ -0.01
MSH5-202ENST00000375740 PTGISQ16647 500 aa15□□□□□ -0.01
MSH5-202ENST00000375740 KCTD19Q17RG1 926 aaPredicted RBP15□□□□□ -0.01
MSH5-202ENST00000375740 RIOX2Q8IUF8 465 aa15□□□□□ -0.01
MSH5-202ENST00000375740 DDX47Q9H0S4 455 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 CTTNBP2NLQ9P2B4 639 aa15□□□□□ -0.01
MSH5-202ENST00000375740 SOWAHBA6NEL2 793 aa15□□□□□ -0.01
MSH5-202ENST00000375740 H0YCG3 227 aa15□□□□□ -0.01
MSH5-202ENST00000375740 SART1O43290 800 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 MMEP08473 750 aa15□□□□□ -0.01
MSH5-202ENST00000375740 LIG4P49917 911 aa15□□□□□ -0.01
MSH5-202ENST00000375740 GADL1Q6ZQY3 521 aa15□□□□□ -0.01
MSH5-202ENST00000375740 USP37Q86T82 979 aa15□□□□□ -0.01
MSH5-202ENST00000375740 NLRP14Q86W24 1093 aa15□□□□□ -0.01
MSH5-202ENST00000375740 ASAP3Q8TDY4 903 aa15□□□□□ -0.01
MSH5-202ENST00000375740 ZNF516Q92618 1163 aa15□□□□□ -0.01
MSH5-202ENST00000375740 PI4K2AQ9BTU6 479 aa15□□□□□ -0.01
MSH5-202ENST00000375740 CHORDC1Q9UHD1 332 aaPredicted RBP15□□□□□ -0.01
MSH5-202ENST00000375740 CSADQ9Y600 493 aa15□□□□□ -0.01
MSH5-202ENST00000375740 ALG6Q9Y672 507 aa15□□□□□ -0.01
MSH5-202ENST00000375740 LOC285556D6RIA3 1793 aa15□□□□□ -0.01
MSH5-202ENST00000375740 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 UTRNP46939 3433 aa15□□□□□ -0.01
MSH5-202ENST00000375740 DNM1LO00429 736 aa15□□□□□ -0.01
MSH5-202ENST00000375740 NEBLO76041 1014 aa15□□□□□ -0.01
MSH5-202ENST00000375740 HADHBP55084 474 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 FMO1Q01740 532 aa15□□□□□ -0.01
MSH5-202ENST00000375740 DCAF12L1Q5VU92 463 aa15□□□□□ -0.01
MSH5-202ENST00000375740 ALS2CLQ60I27 953 aa15□□□□□ -0.01
MSH5-202ENST00000375740 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
MSH5-202ENST00000375740 PIK3R5Q8WYR1 880 aa15□□□□□ -0.01
MSH5-202ENST00000375740 DHX38Q92620 1227 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
MSH5-202ENST00000375740 FBXO40Q9UH90 709 aa15□□□□□ -0.01
MSH5-202ENST00000375740 PTPRFP10586 1907 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 GSTTP1A0A1W2PQM5 241 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 CCDC188H7C350 402 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 GZMAP12544 262 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 CYP11B1P15538 503 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 GLRA2P23416 452 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 STRN3Q13033 797 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 TCEAL1Q15170 157 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 KDM7AQ6ZMT4 941 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 YTHDF3Q7Z739 585 aaKnown RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 IQCKQ8N0W5 287 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 DCPSQ96C86 337 aaKnown RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 PORCNQ9H237 461 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 PPANQ9NQ55 473 aaKnown RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 IGKV6D-21A0A0A0MT36 114 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 E7EVH7 732 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 EXTL3O43909 919 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 FGGP02679 453 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 UBA1P22314 1058 aaKnown RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 ERVK-9P63128 1117 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 C6orf89Q6UWU4 347 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 NIFKQ9BYG3 293 aaKnown RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 SPATC1LQ9H0A9 340 aa14.99□□□□□ -0.01
MSH5-202ENST00000375740 TTC7AQ9ULT0 858 aaPredicted RBP14.99□□□□□ -0.01
MSH5-202ENST00000375740 TMEM110-MUSTN1A8MSY1 372 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 NR1D1P20393 614 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ARL2P36404 184 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 LMBRD2Q68DH5 695 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 NAIF1Q69YI7 327 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 DEPTORQ8TB45 409 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ZBTB45Q96K62 511 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 PCYT2Q99447 389 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 OSBPL7Q9BZF2 842 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 R3HDMLQ9H3Y0 253 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ADARB2Q9NS39 739 aaKnown RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 HAUS2Q9NVX0 235 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 NR2E1Q9Y466 385 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 LRRIQ4A6NIV6 560 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 K7ERI5 159 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 IRF6O14896 467 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 FARP2O94887 1054 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 ABCD1P33897 745 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ACOT2P49753 483 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 WNT7BP56706 349 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms