RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 UBE2HP62256 183 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 PLCB3Q01970 1234 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 KRT17Q04695 432 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 DSC1Q08554 894 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 PSMD2Q13200 908 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 KMT5BQ4FZB7 885 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 EPM2AIP1Q7L775 607 aaPredicted RBP19.04■□□□□ 0.64
C6orf48-207ENST00000375642 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 MICALL1Q8N3F8 863 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 ZNF507Q8TCN5 953 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 SPPL3Q8TCT6 385 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 POMGNT1Q8WZA1 660 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 MRPL38Q96DV4 380 aaKnown RBP19.04■□□□□ 0.64
C6orf48-207ENST00000375642 TIGD1Q96MW7 591 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 IKZF4Q9H2S9 585 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 SLC39A2Q9NP94 309 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 PUF60Q9UHX1 559 aaKnown RBP19.04■□□□□ 0.64
C6orf48-207ENST00000375642 HOOK1Q9UJC3 728 aaKnown RBP19.04■□□□□ 0.64
C6orf48-207ENST00000375642 FAN1Q9Y2M0 1017 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 STYXL1Q9Y6J8 313 aa19.04■□□□□ 0.64
C6orf48-207ENST00000375642 KINO60870 393 aaKnown RBP19.03■□□□□ 0.64
C6orf48-207ENST00000375642 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
C6orf48-207ENST00000375642 OR1G1P47890 313 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 UBE3AQ05086 875 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 ALKAL1Q6UXT8 129 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 CLEC17AQ6ZS10 378 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 COLGALT2Q8IYK4 626 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 POF1BQ8WVV4 589 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 TMEM169Q96HH4 297 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 CXCL16Q9H2A7 254 aa19.03■□□□□ 0.64
C6orf48-207ENST00000375642 AGO2Q9UKV8 859 aaKnown RBP19.03■□□□□ 0.64
C6orf48-207ENST00000375642 UBE4BO95155 1302 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 SMIM28A0A1B0GU29 152 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 NRP1O14786 923 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 ADSSP30520 456 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 STK4Q13043 487 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 SKIV2LQ15477 1246 aaKnown RBP19.02■□□□□ 0.64
C6orf48-207ENST00000375642 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 XKR4Q5GH76 650 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 SCFD1Q8WVM8 642 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 IGSF21Q96ID5 467 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 SNX27Q96L92 541 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 PLEKHA5Q9HAU0 1116 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 LZTS1Q9Y250 596 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 RALGAPA2Q2PPJ7 1873 aa19.02■□□□□ 0.64
C6orf48-207ENST00000375642 FAM189A1O60320 539 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 CXCL8P10145 99 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 GARTP22102 1010 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 DNAJB1P25685 340 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 HOXD13P35453 343 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 TNFSF9P41273 254 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 TUSC3Q13454 348 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 PNOCQ13519 176 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 GLRA4Q5JXX5 417 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 ZBTB41Q5SVQ8 909 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 NELFCDQ8IXH7 590 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 NECAB3Q96P71 396 aaPredicted RBP19.01■□□□□ 0.63
C6orf48-207ENST00000375642 GBP4Q96PP9 640 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 PPP1R10Q96QC0 940 aaKnown RBP19.01■□□□□ 0.63
C6orf48-207ENST00000375642 COLEC11Q9BWP8 271 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 RPF1Q9H9Y2 349 aaKnown RBP19.01■□□□□ 0.63
C6orf48-207ENST00000375642 CNTN3Q9P232 1028 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 PRG3Q9Y2Y8 225 aaPredicted RBP19.01■□□□□ 0.63
C6orf48-207ENST00000375642 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
C6orf48-207ENST00000375642 PRRC2BQ5JSZ5 2229 aaKnown RBP19■□□□□ 0.63
C6orf48-207ENST00000375642 NCOR1O75376 2440 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 MEFVO15553 781 aaPredicted RBP19■□□□□ 0.63
C6orf48-207ENST00000375642 RHOBTB3O94955 611 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 CSPG5O95196 566 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 SMC2O95347 1197 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 KCNE1P15382 129 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 ACOT2P49753 483 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 CAMK1Q14012 370 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 KCNB1Q14721 858 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 NAB2Q15742 525 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 ENOX2Q16206 610 aaKnown RBP19■□□□□ 0.63
C6orf48-207ENST00000375642 BMT2Q1RMZ1 405 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 TIGD5Q53EQ6 642 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 TMEM173Q86WV6 379 aaPredicted RBP19■□□□□ 0.63
C6orf48-207ENST00000375642 MICAL1Q8TDZ2 1067 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 TLR9Q9NR96 1032 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 SLC38A7Q9NVC3 462 aa19■□□□□ 0.63
C6orf48-207ENST00000375642 CPSF3Q9UKF6 684 aaKnown RBP19■□□□□ 0.63
C6orf48-207ENST00000375642 TTC26A0AVF1 554 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 CASTOR2A6NHX0 329 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 SNRPFP62306 86 aaKnown RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 KNOP1Q1ED39 458 aaKnown RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 ARMCX5Q6P1M9 558 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 HS2ST1Q7LGA3 356 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 DDX53Q86TM3 631 aaKnown RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 ELOA2Q8IYF1 753 aaPredicted RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 KIAA0895Q8NCT3 520 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 BCL7CQ8WUZ0 217 aaPredicted RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 ZMAT2Q96NC0 199 aaKnown RBP18.99■□□□□ 0.63
C6orf48-207ENST00000375642 CBWD1Q9BRT8 395 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 RMND1Q9NWS8 449 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 STK39Q9UEW8 545 aa18.99■□□□□ 0.63
C6orf48-207ENST00000375642 KIAA1671Q9BY89 1806 aa18.98■□□□□ 0.63
C6orf48-207ENST00000375642 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms