RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SHDQ96IW2 340 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 ACCSQ96QU6 501 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 PIGSQ96S52 555 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 STAP2Q9UGK3 403 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 KCNJ14Q9UNX9 436 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CYP2D7A0A087X1C5 515 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 FOXP2O15409 715 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 HSPA4LO95757 839 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 SERPING1P05155 500 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CPA1P15085 419 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 CA4P22748 312 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 RASAL3Q86YV0 1011 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MRPL9Q9BYD2 267 aaKnown RBP6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MIR1-1HGQ9H1L0 117 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 RWDD2AQ9UIY3 292 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 MTMR6Q9Y217 621 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 L3MBTL1Q9Y468 752 aa6.67□□□□□ -1.34
PTPN3-202ENST00000374541 TLR2O60603 784 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ESRRBO95718 433 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 IRX1P78414 480 aaPredicted RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SLC39A14Q15043 492 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DNAJC24Q6P3W2 148 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 TRMT10CQ7L0Y3 403 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF558Q96NG5 402 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 USP28Q96RU2 1077 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZSWIM6Q9HCJ5 1215 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 VPS54Q9P1Q0 977 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CDV3Q9UKY7 258 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 RASSF10A6NK89 507 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 GYG2O15488 501 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CTIFO43310 598 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 RNASEH1O60930 286 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 MMEP08473 750 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CCDC159P0C7I6 412 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SAT1P21673 171 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 RWDD2BP57060 319 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 OCRLQ01968 901 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 MESDQ14696 234 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 KCNB1Q14721 858 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CASP8Q14790 479 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 UAP1L1Q3KQV9 507 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PLPP4Q5VZY2 271 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CAPN12Q6ZSI9 719 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SEPT1Q8WYJ6 367 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZDHHC15Q96MV8 337 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SLC9A2Q9UBY0 812 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SYNGAP1Q96PV0 1343 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PITPNM2Q9BZ72 1349 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 HAUS5O94927 633 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ATICP31939 592 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 FKBP3Q00688 224 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PTH1RQ03431 593 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DPYDQ12882 1025 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DNAAF3Q8N9W5 541 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 STKLD1Q8NE28 680 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 GDAP1Q8TB36 358 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SPACA7Q96KW9 195 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DACH2Q96NX9 599 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PAIP2BQ9ULR5 123 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PCDHA7Q9UN72 937 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 XIRP1Q702N8 1843 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 K7ERI5 159 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 OPLAHO14841 1288 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 MAGEB2O15479 319 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DLATP10515 647 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 AVPR1AP37288 418 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 TRPC1P48995 793 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ARL4CP56559 192 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 AP1B1Q10567 949 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 MRPL28Q13084 256 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 FAM110CQ1W6H9 321 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 KIZQ2M2Z5 673 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 CEP55Q53EZ4 464 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZC3H12BQ5HYM0 836 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 HP1BP3Q5SSJ5 553 aaPredicted RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF658Q5TYW1 1059 aaPredicted RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SAPCD2Q86UD0 394 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 LARP4BQ92615 738 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 MRPS31Q92665 395 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 ZBTB9Q96C00 473 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PITPNM3Q9BZ71 974 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SPTLC3Q9NUV7 552 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DBNLQ9UJU6 430 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SUFUQ9UMX1 484 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 NOVA2Q9UNW9 492 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 GOLGA8JA6NMD2 632 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 H3BRJ5 948 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 PRKAB2O43741 272 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 E2F6O75461 281 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 RARS2Q5T160 578 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 FAM173BQ6P4H8 233 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 SPATA2LQ8IUW3 424 aaPredicted RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 TRIM59Q8IWR1 403 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms