RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SDE2Q6IQ49 451 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SZRD1Q7Z422 152 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 RCOR2Q8IZ40 523 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 GLT1D1Q96MS3 346 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 NSMCE4AQ9NXX6 385 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 MTSS1O43312 755 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 HADHAP40939 763 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 MTFR1Q15390 333 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 C4orf22Q6V702 233 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 EPM2AIP1Q7L775 607 aaPredicted RBP11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 PPM1NQ8N819 430 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 GPRASP2Q96D09 838 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 MKNK1Q9BUB5 465 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 HSPBP1Q9NZL4 362 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 G3BP2Q9UN86 482 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 PLAAQ9Y263 795 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 WDR91A4D1P6 747 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 GTF2A2P52657 109 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 HUNKP57058 714 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 EMC2Q15006 297 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SCARF1Q14162 830 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 YY1AP1Q9H869 796 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SARS2Q9NP81 518 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SNAP23O00161 211 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 CSF1RP07333 972 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 RALBP11234 206 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 PMS2P54278 862 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 CCNYL1Q8N7R7 359 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
PHACTR4-202ENST00000373839 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CYP2C9P11712 490 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 SULT1E1P49888 294 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 KRT17Q04695 432 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 GPS1Q13098 491 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CDC42EP5Q6NZY7 148 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 MFN1Q8IWA4 741 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 UBA6A0AVT1 1052 aaPredicted RBP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 MAP4P27816 1152 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 RGS2P41220 211 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 POU5F1BQ06416 359 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.531e-5■■■□□ 15.7
PHACTR4-202ENST00000373839 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 STK33Q9BYT3 514 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 PRR12Q9ULL5 1215 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 MMEP08473 750 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 TYK2P29597 1187 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CD302Q8IX05 232 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CALML6Q8TD86 181 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CEP19Q96LK0 163 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 CATSPERBQ9H7T0 1116 aa11.71□□□□□ -0.53
PHACTR4-202ENST00000373839 PIGHQ14442 188 aaPredicted RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 SYTL3Q4VX76 610 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 RNF168Q8IYW5 571 aaPredicted RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 HINFPQ9BQA5 517 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 TRIM9Q9C026 710 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 ZFATQ9P243 1243 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 SH3BP1Q9Y3L3 701 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 PNPLA6Q8IY17 1366 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 GLI2P10070 1586 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 PRRG1O14668 218 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 CD2BP2O95400 341 aaKnown RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 CYP2C8P10632 490 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 STAT4Q14765 748 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 ZNF677Q86XU0 584 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 ATL2Q8NHH9 583 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 XAB2Q9HCS7 855 aaKnown RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.54
PHACTR4-202ENST00000373839 IGSF9BQ9UPX0 1349 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 CCDC22O60826 627 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 TRIM49P0CI25 452 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 TRIM49CP0CI26 452 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 GFPT1Q06210 699 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 PDIA2Q13087 525 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 ATPAF2Q8N5M1 289 aa11.7□□□□□ -0.54
PHACTR4-202ENST00000373839 SLITRK1Q96PX8 696 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms