RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.1■□□□□ 0.97
HDAC1-201ENST00000373548 CES2O00748 559 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 KCNK3O14649 394 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 FAM189A1O60320 539 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 BUB1BO60566 1050 aaPredicted RBP21.09■□□□□ 0.97
HDAC1-201ENST00000373548 TOM1L1O75674 476 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 CELF2O95319 508 aaKnown RBP21.09■□□□□ 0.97
HDAC1-201ENST00000373548 PRKCBP05771 671 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 MMEP08473 750 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 PIK3CAP42336 1068 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 PLA2G4AP47712 749 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 ZNF467Q7Z7K2 595 aaPredicted RBP21.09■□□□□ 0.97
HDAC1-201ENST00000373548 NT5DC3Q86UY8 548 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 RHPN2Q8IUC4 686 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 C2orf69Q8N8R5 385 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 ACO2Q99798 780 aaKnown RBP21.09■□□□□ 0.97
HDAC1-201ENST00000373548 PTPN18Q99952 460 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 ERAP1Q9NZ08 941 aa21.09■□□□□ 0.97
HDAC1-201ENST00000373548 RTN2O75298 545 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 GH1P01241 217 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 GJB1P08034 283 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 BIRC3Q13489 604 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 MAPK6Q16659 721 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 GPR142Q7Z601 462 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 LRRC1Q9BTT6 524 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 C2orf40Q9H1Z8 148 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 L1RE1Q9UN81 338 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 COG5Q9UP83 839 aa21.08■□□□□ 0.97
HDAC1-201ENST00000373548 ABLIM1O14639 778 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 SNAI1O95863 264 aaPredicted RBP21.08■□□□□ 0.96
HDAC1-201ENST00000373548 LGALS2P05162 132 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 GZMAP12544 262 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 CLCN3P51790 818 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 CDR2Q01850 454 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 EFCAB12Q6NXP0 572 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 ZBTB33Q86T24 672 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 DDX1Q92499 740 aaKnown RBP21.08■□□□□ 0.96
HDAC1-201ENST00000373548 RRAGCQ9HB90 399 aa21.08■□□□□ 0.96
HDAC1-201ENST00000373548 ZMYND10O75800 440 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 C22orf31O95567 290 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 MCM3P25205 808 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 TNFSF9P41273 254 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 ADCYAP1R1P41586 468 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 PDE6CP51160 858 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 WDR44Q5JSH3 913 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 CCDC70Q6NSX1 233 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 BRSK2Q8IWQ3 736 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 OR5B17Q8NGF7 314 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 ZNF668Q96K58 619 aaPredicted RBP21.07■□□□□ 0.96
HDAC1-201ENST00000373548 PBKQ96KB5 322 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 FAM81BQ96LP2 452 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 MAP2K7O14733 419 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 KRT5P13647 590 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 SPOPLQ6IQ16 392 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 METTL13Q8N6R0 699 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 HDAC7Q8WUI4 952 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 AFG1LQ8WV93 481 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 HES6Q96HZ4 224 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 NLRP4Q96MN2 994 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 PARK7Q99497 189 aaKnown RBP21.07■□□□□ 0.96
HDAC1-201ENST00000373548 TCHPQ9BT92 498 aa21.07■□□□□ 0.96
HDAC1-201ENST00000373548 INSRRP14616 1297 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 HADHBP55084 474 aaKnown RBP21.06■□□□□ 0.96
HDAC1-201ENST00000373548 TFDP1Q14186 410 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 GRB14Q14449 540 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 TCEAL1Q15170 157 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 RHOT2Q8IXI1 618 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 PPTC7Q8NI37 304 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 EMID1Q96A84 441 aaPredicted RBP21.06■□□□□ 0.96
HDAC1-201ENST00000373548 DMGDHQ9UI17 866 aaKnown RBP21.06■□□□□ 0.96
HDAC1-201ENST00000373548 AMFRQ9UKV5 643 aa21.06■□□□□ 0.96
HDAC1-201ENST00000373548 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.05■□□□□ 0.96
HDAC1-201ENST00000373548 RNASE9P60153 205 aaKnown RBP21.05■□□□□ 0.96
HDAC1-201ENST00000373548 GPC5P78333 572 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 MCL1Q07820 350 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 FAM110CQ1W6H9 321 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 ZNF484Q5JVG2 852 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 DPP9Q86TI2 863 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 USP38Q8NB14 1042 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 FZD8Q9H461 694 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 APOBEC3GQ9HC16 384 aaKnown RBP21.05■□□□□ 0.96
HDAC1-201ENST00000373548 ZSWIM8A7E2V4 1837 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 OGTO15294 1046 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 CALCAP01258 141 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 PTENP60484 403 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 IGBP1P78318 339 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 MRPS25P82663 173 aaKnown RBP21.05■□□□□ 0.96
HDAC1-201ENST00000373548 MAML3Q96JK9 1138 aa21.05■□□□□ 0.96
HDAC1-201ENST00000373548 ACKR2O00590 384 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 CEP104O60308 925 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 PROZP22891 400 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 HDXQ7Z353 690 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 ACTRT1Q8TDG2 376 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 CTTNBP2NLQ9P2B4 639 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 INO80B-WBP1J3KQ70 363 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 B4GALT5O43286 388 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 ZNF286BP0CG31 522 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 SLC7A5Q01650 507 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 SCARA3Q6AZY7 606 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms