RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PMLP29590 882 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SREBF1P36956 1147 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 PAPOLAP51003 745 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 DRP2Q13474 957 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 FSCBQ5H9T9 825 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 AGBL2Q5U5Z8 902 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 WDR93Q6P2C0 686 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SCG3Q8WXD2 468 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SMARCAD1Q9H4L7 1026 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 EFHC2Q5JST6 749 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 RBBP8NLQ8NC74 664 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 KIF12Q96FN5 646 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ACAP3Q96P50 834 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 EPN3Q9H201 632 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 MAGEB2O15479 319 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 HAUS5O94927 633 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 TSPY1Q01534 308 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 GUCY1A3Q02108 690 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 EMC2Q15006 297 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 NT5DC1Q5TFE4 455 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ITPRIPL1Q6GPH6 555 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SLC30A5Q8TAD4 765 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SKA2Q8WVK7 121 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 CYTH2Q99418 400 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ERP44Q9BS26 406 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 FAM129AQ9BZQ8 928 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 CACYBPQ9HB71 228 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SCOCQ9UIL1 159 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ZFP69BQ9UJL9 534 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1-201ENST00000370966 H3BRJ5 948 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 RAD51CO43502 376 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 PPARGP37231 505 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 RBP5P82980 135 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 PRKCEQ02156 737 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 TMEM143Q96AN5 459 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 TRIM62Q9BVG3 475 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MAP3K20Q9NYL2 800 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 A0A087X0T9 212 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 CHEK2O96017 543 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MYL3P08590 195 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 FAM228BP0C875 321 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 GPRASP2Q96D09 838 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MLXIPLQ9NP71 852 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 SMAPO00193 183 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 HLA-DRAP01903 254 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 COMTP21964 271 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 CARSP49589 748 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 ARFIP2P53365 341 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 TRIM51Q9BSJ1 452 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MAGEB5Q9BZ81 275 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 OSBPL8Q9BZF1 889 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 ROPN1BQ9BZX4 212 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 ROPN1Q9HAT0 212 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 MST1RQ04912 1400 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 AP5Z1O43299 807 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 EPHB1P54762 984 aa12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.54□□□□□ -0.4
DEPDC1-201ENST00000370966 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 FGFR4P22455 802 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ARPP19P56211 112 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 PAPD7Q5XG87 772 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ICAM1P05362 532 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 COPS2P61201 443 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 MYLK4Q86YV6 388 aaPredicted RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ZNF668Q96K58 619 aaPredicted RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms