RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TAL1P17542 331 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ALDH5A1P51649 535 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 VSNL1P62760 191 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 NOP14P78316 857 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TAF1CQ15572 869 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 C6orf163Q5TEZ5 329 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 EFCAB12Q6NXP0 572 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF662Q6ZS27 426 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CBWD2Q8IUF1 395 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC9A9Q8IVB4 645 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC117Q8IWD4 279 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 RBBP8NLQ8NC74 664 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CFAP57Q96MR6 1250 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CALN1Q9BXU9 219 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 NIF3L1Q9GZT8 377 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 DDX47Q9H0S4 455 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CARD9Q9H257 536 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 FBXL5Q9UKA1 691 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PACSIN2Q9UNF0 486 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 BAZ2AQ9UIF9 1905 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TNPO2O14787 897 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CLTAP09496 248 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 HNRNPH3P31942 346 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 STX2P32856 288 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PBX1P40424 430 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 MARSP56192 900 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ADCY2Q08462 1091 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 DGKDQ16760 1214 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 C6orf118Q5T5N4 469 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TWF2Q6IBS0 349 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 SYDE1Q6ZW31 735 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PASD1Q8IV76 773 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 SIX6OS1Q8N1H7 587 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 MBOAT7Q96N66 472 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 GLIS2Q9BZE0 524 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM7Q9C029 511 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 LACRTQ9GZZ8 138 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TJP1Q07157 1748 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 FOXN3O00409 490 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF185O15231 689 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PJA2O43164 708 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 SLURP2P0DP57 97 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ITGB5P18084 799 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PSMC1P62191 440 aaKnown RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CDR2Q01850 454 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CYP24A1Q07973 514 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PPIL2Q13356 520 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 NAA25Q14CX7 972 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 WDR72Q3MJ13 1102 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 MIIPQ5JXC2 388 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 LMBRD2Q68DH5 695 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CCNI2Q6ZMN8 369 aaPredicted RBP5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TADA2BQ86TJ2 420 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC13Q8IYE1 715 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ABI1Q8IZP0 508 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 TPCN2Q8NHX9 752 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP8B4Q8TF62 1192 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 ATP2A3Q93084 1043 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 OPTNQ96CV9 577 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 KIF12Q96FN5 646 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 LRRC1Q9BTT6 524 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 KIFC3Q9BVG8 833 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 CYP39A1Q9NYL5 469 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 PAPPAQ13219 1627 aa5.66□□□□□ -1.5
SMNDC1-202ENST00000369603 NKRFO15226 690 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 HOXD10P28358 340 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 NFX1Q12986 1120 aaKnown RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 VGLL4Q14135 290 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM132DQ14C87 1099 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 Q3C1V9 767 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 GKAP1Q5VSY0 366 aaPredicted RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 WDR93Q6P2C0 686 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 CASC4Q6P4E1 433 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 MMS22LQ6ZRQ5 1243 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 PCGF5Q86SE9 256 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 PHLDB2Q86SQ0 1253 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 CD302Q8IX05 232 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 USP38Q8NB14 1042 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ZC3H15Q8WU90 426 aaKnown RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 PRPF31Q8WWY3 499 aaKnown RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 KLRG1Q96E93 195 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF446Q9NWS9 450 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 TOGARAM1Q9Y4F4 1720 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 M0QYV0 167 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 RASGRF2O14827 1237 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 DYNC1LI2O43237 492 aaPredicted RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 PRKCIP41743 596 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 RTP1P59025 263 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 GTF2BQ00403 316 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF211Q13398 564 aaPredicted RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 KCTD16Q68DU8 428 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ACAD10Q6JQN1 1059 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 CCDC137Q6PK04 289 aaKnown RBP5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 ZPBP2Q6X784 338 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 DSTYKQ6XUX3 929 aa5.65□□□□□ -1.5
SMNDC1-202ENST00000369603 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms