RNA–Protein interactions for RNA: ENST00000368884.7

PSMD4-202, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD4, Length 1,350 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-202ENST00000368884 KIAA0895Q8NCT3 520 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 MRPL38Q96DV4 380 aaKnown RBP13.19□□□□□ -0.3
PSMD4-202ENST00000368884 TMEM169Q96HH4 297 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 LMAN2LQ9H0V9 348 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
PSMD4-202ENST00000368884 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 HOOK1Q9UJC3 728 aaKnown RBP13.19□□□□□ -0.3
PSMD4-202ENST00000368884 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
PSMD4-202ENST00000368884 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
PSMD4-202ENST00000368884 CITO14578 2027 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 SMIM28A0A1B0GU29 152 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 NRP1O14786 923 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 FAM189A1O60320 539 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 GARTP22102 1010 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 DNAJB1P25685 340 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 ADSSP30520 456 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 ACOT2P49753 483 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 KRT17Q04695 432 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 UBE3AQ05086 875 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 PPP2R3AQ06190 1150 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 KCNB1Q14721 858 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CCDC85BQ15834 202 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 BCL7CQ8WUZ0 217 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 PPM1EQ8WY54 764 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 IGSF21Q96ID5 467 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 PCIF1Q9H4Z3 704 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CNTN3Q9P232 1028 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CPSF3Q9UKF6 684 aaKnown RBP13.18□□□□□ -0.3
PSMD4-202ENST00000368884 CHD9Q3L8U1 2897 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
PSMD4-202ENST00000368884 SMC2O95347 1197 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 KCNE1P15382 129 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 CAMK1Q14012 370 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 NAB2Q15742 525 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 ENOX2Q16206 610 aaKnown RBP13.17□□□□□ -0.3
PSMD4-202ENST00000368884 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
PSMD4-202ENST00000368884 RABGGTAQ92696 567 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
PSMD4-202ENST00000368884 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
PSMD4-202ENST00000368884 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 COLEC11Q9BWP8 271 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
PSMD4-202ENST00000368884 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
PSMD4-202ENST00000368884 TTC26A0AVF1 554 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 TULP1O00294 542 aaPredicted RBP13.16□□□□□ -0.3
PSMD4-202ENST00000368884 CLIC2O15247 247 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 TGFB1I1O43294 461 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
PSMD4-202ENST00000368884 IRS1P35568 1242 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 SPAG1Q07617 926 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
PSMD4-202ENST00000368884 TIGD5Q53EQ6 642 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
PSMD4-202ENST00000368884 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 MICAL1Q8TDZ2 1067 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 PLEKHA5Q9HAU0 1116 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 SLC38A7Q9NVC3 462 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
PSMD4-202ENST00000368884 CHD7Q9P2D1 2997 aa13.15□□□□□ -0.3
PSMD4-202ENST00000368884 F8W810 466 aa13.15□□□□□ -0.3
PSMD4-202ENST00000368884 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 KIF20AO95235 890 aa13.15□□□□□ -0.3
PSMD4-202ENST00000368884 ERVFC1P60507 584 aa13.15□□□□□ -0.3
PSMD4-202ENST00000368884 SNRPFP62306 86 aaKnown RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 SOX4Q06945 474 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
PSMD4-202ENST00000368884 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
PSMD4-202ENST00000368884 CD302Q8IX05 232 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms