RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ALDH7A1P49419 539 aaKnown RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 YARSP54577 528 aaKnown RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 POSTNQ15063 836 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 SLC10A6Q3KNW5 377 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 ALKAL1Q6UXT8 129 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 MRPL38Q96DV4 380 aaKnown RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 PAAF1Q9BRP4 392 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 EXOC7Q9UPT5 735 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 PRG3Q9Y2Y8 225 aaPredicted RBP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 NRP1O14786 923 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 THP07101 528 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 IRS1P35568 1242 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 PLCB3Q01970 1234 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 CCDC85BQ15834 202 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 XKR4Q5GH76 650 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 MAFAQ8NHW3 353 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 POMGNT1Q8WZA1 660 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 TOPORSQ9NS56 1045 aaPredicted RBP16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 MARCH5Q9NX47 278 aa16.45■□□□□ 0.22
SMPDL3A-201ENST00000368440 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CASTOR2A6NHX0 329 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 PPM1AP35813 382 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 OR1G1P47890 313 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 ACOT2P49753 483 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 STXBP4Q6ZWJ1 553 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 TMEM130Q8N3G9 435 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 IGSF21Q96ID5 467 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 VN1R3Q9BXE9 311 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 LMCD1Q9NZU5 365 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CPSF3Q9UKF6 684 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 AGO2Q9UKV8 859 aaKnown RBP16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 SLC34A2O95436 690 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CLTAP09496 248 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 UBE2HP62256 183 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 SOX4Q06945 474 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 SPAG1Q07617 926 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 TUSC3Q13454 348 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 SLFN12LQ6IEE8 588 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 SAAL1Q96ER3 474 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 PCIF1Q9H4Z3 704 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 FAN1Q9Y2M0 1017 aa16.44■□□□□ 0.22
SMPDL3A-201ENST00000368440 PRUNE2Q8WUY3 3088 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 UBE4BO95155 1302 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 ALDH2P05091 517 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 IGFBP6P24592 240 aaPredicted RBP16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 ERVFC1P60507 584 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 PTPROQ16827 1216 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 BMT2Q1RMZ1 405 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 TMEM169Q96HH4 297 aa16.43■□□□□ 0.22
SMPDL3A-201ENST00000368440 TTC26A0AVF1 554 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 KCNE1P15382 129 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 UBE3AQ05086 875 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 PSMD2Q13200 908 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 C18orf25Q96B23 403 aaPredicted RBP16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 TLR9Q9NR96 1032 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 GARTP22102 1010 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 KCNB1Q14721 858 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 ADGRD2Q7Z7M1 963 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 LZTS1Q9Y250 596 aa16.42■□□□□ 0.22
SMPDL3A-201ENST00000368440 CLIC2O15247 247 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 KIF4AO95239 1232 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 WNT7BP56706 349 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 KRT17Q04695 432 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 KYAT1Q16773 422 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 HASPINQ8TF76 798 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 CCDC34Q96HJ3 373 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 FAM213AQ9BRX8 229 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
SMPDL3A-201ENST00000368440 TUBGCP4Q9UGJ1 667 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms