RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 ROPN1Q9HAT0 212 aaPredicted RBP11.18□□□□□ -0.62
HIPK1-202ENST00000361587 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 AGO2Q9UKV8 859 aaKnown RBP11.18□□□□□ -0.62
HIPK1-202ENST00000361587 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 DNAJC6O75061 913 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 MAP4P27816 1152 aaKnown RBP11.18□□□□□ -0.62
HIPK1-202ENST00000361587 LRRC14Q15048 493 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
HIPK1-202ENST00000361587 SGMS1Q86VZ5 419 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 PALMDQ9NP74 551 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 SELENONQ9NZV5 590 aa11.18□□□□□ -0.62
HIPK1-202ENST00000361587 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
HIPK1-202ENST00000361587 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 ZNF263O14978 683 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 SRP72O76094 671 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 APLFQ8IW19 511 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PHF21AQ96BD5 680 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PLEKHA5Q9HAU0 1116 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 RNF146Q9NTX7 359 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 MTO1Q9Y2Z2 717 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PJA2O43164 708 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 WDR47O94967 919 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PID1Q7Z2X4 250 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 KIAA2013Q8IYS2 634 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 C3orf70A6NLC5 250 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 TCP11X1B4DZS4 312 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 DEFA1P59665 94 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 DEFA3P59666 94 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 SNAP25P60880 206 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 VEPH1Q14D04 833 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 AASDHQ4L235 1098 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PLD3Q8IV08 490 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 MFN1Q8IWA4 741 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 ZNF473Q8WTR7 871 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 DCUN1D1Q96GG9 259 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 FOPNLQ96NB1 174 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 ZNF556Q9HAH1 456 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 ZNF335Q9H4Z2 1342 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 GSNP06396 782 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 IRX1P78414 480 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 FOXD4Q12950 439 aaPredicted RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 NME3Q13232 169 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 STX3Q13277 289 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 DMC1Q14565 340 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 PRMT1Q99873 361 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 STK33Q9BYT3 514 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 RAVER2Q9HCJ3 691 aaKnown RBP11.17□□□□□ -0.62
HIPK1-202ENST00000361587 SEPT3Q9UH03 358 aa11.17□□□□□ -0.62
HIPK1-202ENST00000361587 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 PRPF4O43172 522 aaKnown RBP eCLIP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 FAM107AO95990 144 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 CCND1P24385 295 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 TPI1P60174 286 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 ZNF772Q68DY9 489 aaPredicted RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 ARHGEF26Q96DR7 871 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 RMDN2Q96LZ7 410 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 ACAD9Q9H845 621 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 FAM32AQ9Y421 112 aaKnown RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 EIF3HO15372 352 aaKnown RBP eCLIP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 LTKP29376 864 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 HSPA13P48723 471 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 KLC1Q07866 573 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 PIGHQ14442 188 aaPredicted RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 CCDC144BQ3MJ40 725 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 TRIM69Q86WT6 500 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 USP6NLQ92738 828 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 DCP1AQ9NPI6 582 aaPredicted RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 HIST1H2AGP0C0S8 130 aaPredicted RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 HIST1H2ADP20671 130 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 SCP2P22307 547 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 ADORA2BP29275 332 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 ALDH18A1P54886 795 aaKnown RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 SNRPFP62306 86 aaKnown RBP11.16□□□□□ -0.62
HIPK1-202ENST00000361587 SWSAP1Q6NVH7 229 aa11.16□□□□□ -0.62
HIPK1-202ENST00000361587 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms