RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 DNAJC12Q9UKB3 198 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 AJAP1Q9UKB5 411 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PTPN22Q9Y2R2 807 aa22.7■■□□□ 1.22
MAP1LC3A-201ENST00000360668 A0A1B0GUA9 196 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SSU72P8A0A1W2PR75 194 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 C4BPAP04003 597 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 NCBP1Q09161 790 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 MAPK8IP2Q13387 824 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ZACNQ401N2 412 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 HGSNATQ68CP4 663 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PHLDB3Q6NSJ2 640 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CPB2Q96IY4 423 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CCDC42Q96M95 316 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 OSMRQ99650 979 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CDHR5Q9HBB8 845 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 HMX1Q9NP08 348 aaPredicted RBP22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 RAB20Q9NX57 234 aa22.69■■□□□ 1.22
MAP1LC3A-201ENST00000360668 EIF3CLB5ME19 914 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TULP1O00294 542 aaPredicted RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 RPLP2P05387 115 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 EIF4BP23588 611 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 STAT1P42224 750 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CRYBB1P53674 252 aaPredicted RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 GDF6Q6KF10 455 aaPredicted RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 WDR49Q8IV35 697 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 THNSL1Q8IYQ7 743 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TAS1R2Q8TE23 839 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SEMA4DQ92854 862 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 EIF3CQ99613 913 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 GINS2Q9Y248 185 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PTCH2Q9Y6C5 1203 aa22.68■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ZC3H11AO75152 810 aaKnown RBP eCLIP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CATSPER4Q7RTX7 472 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 APBB1IPQ7Z5R6 666 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CDR2LQ86X02 465 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 C16orf45Q96MC5 204 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ADPGKQ9BRR6 497 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 BZW2Q9Y6E2 419 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PTPRJQ12913 1337 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 F8VZ95 297 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 IL18RAPO95256 599 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 MYCNP04198 464 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PLEKP08567 350 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CLTAP09496 248 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 AXLP30530 894 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 EIF4A3P38919 411 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PRKCIP41743 596 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 DRAP1Q14919 205 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SNX17Q15036 470 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ENOX2Q16206 610 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 DCAF4L1Q3SXM0 396 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 IRF2BP2Q7Z5L9 587 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 RSPH3Q86UC2 560 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ACRBPQ8NEB7 543 aa22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TSEN34Q9BSV6 310 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 RPF1Q9H9Y2 349 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 UBE2TQ9NPD8 197 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-201ENST00000360668 MOXD2PA6NHM9 499 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FERP16591 822 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FGFR4P22455 802 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SOX5P35711 763 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 KRT83P78385 493 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 KLHL30Q0D2K2 578 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TDRD12Q587J7 1177 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FAM47CQ5HY64 1035 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 TDRD10Q5VZ19 366 aaKnown RBP22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 LMBRD2Q68DH5 695 aaPredicted RBP22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 LHX8Q68G74 356 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 RPAINQ86UA6 219 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 SERINC5Q86VE9 423 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ARHGEF19Q8IW93 802 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 NT5C1BQ96P26 610 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 DEF6Q9H4E7 631 aa22.66■■□□□ 1.22
MAP1LC3A-201ENST00000360668 GRIN2DO15399 1336 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 B4GALT4O60513 344 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 LRRN2O75325 713 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 IPO7O95373 1038 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 STAG3L1P0CL83 205 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 HOXA11P31270 313 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ACLYP53396 1101 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 MRPS6P82932 125 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 PTPN11Q06124 597 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ASTE1Q2TB18 679 aaPredicted RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CEP120Q8N960 986 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FAM81BQ96LP2 452 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CELF4Q9BZC1 486 aaKnown RBP22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 GPR88Q9GZN0 384 aa22.65■■□□□ 1.22
MAP1LC3A-201ENST00000360668 M0QZ92 97 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 LCA5LO95447 670 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 HLA-DRAP01903 254 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 CCDC172P0C7W6 258 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 ANXA13P27216 316 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 KIF11P52732 1056 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 BIRC3Q13489 604 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 DUOXA2Q1HG44 320 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 NOTUMQ6P988 496 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 OR5B17Q8NGF7 314 aa22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 REXO2Q9Y3B8 237 aaKnown RBP22.64■■□□□ 1.22
MAP1LC3A-201ENST00000360668 FRMPD3Q5JV73 1810 aa22.64■■□□□ 1.21
MAP1LC3A-201ENST00000360668 ANK1P16157 1881 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms