RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 DGAT1O75907 488 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 P4HA1P13674 534 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 PSMA2P25787 234 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 KCTD2Q14681 263 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 DBN1Q16643 649 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 SEZ6Q53EL9 994 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 TMEM35BQ8NCS4 154 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 LPAR1Q92633 364 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 GBP5Q96PP8 586 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 AKT3Q9Y243 479 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 MAD1L1Q9Y6D9 718 aa13.05□□□□□ -0.32
COL20A1-201ENST00000358894 UBE4BO95155 1302 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 NOL4O94818 638 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 RHOT1Q8IXI2 618 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 MYCBPAPQ8TBZ2 947 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 PRMT1Q99873 361 aaKnown RBP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 TBX20Q9UMR3 447 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 SYNJ2BP-COX16A0A087WUM0 186 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 RARRES1P49788 294 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 PRKCEQ02156 737 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 KYNUQ16719 465 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 COBLL1Q53SF7 1204 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 IZUMO3Q5VZ72 239 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 KDM7AQ6ZMT4 941 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 C1orf186Q6ZWK4 172 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 TSC22D3Q99576 134 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 GLIS2Q9BZE0 524 aaPredicted RBP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 COX16Q9P0S2 106 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 H0Y3Z8 333 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 RANBP1P43487 201 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 TTMPQ5BVD1 217 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 CAPRIN2Q6IMN6 1127 aaKnown RBP13.04□□□□□ -0.32
COL20A1-201ENST00000358894 ARHGEF19Q8IW93 802 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 CEP120Q8N960 986 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 TMEM8AQ9HCN3 771 aa13.04□□□□□ -0.32
COL20A1-201ENST00000358894 FAM107AO95990 144 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 NPTX2P47972 431 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 DLG4P78352 724 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 GPS1Q13098 491 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 MAPK6Q16659 721 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 AADACL2Q6P093 401 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 SLC13A5Q86YT5 568 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 TJP3O95049 919 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 HLA-DRAP01903 254 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 PDHA1P08559 390 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 MIPOL1Q8TD10 442 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 MORC4Q8TE76 937 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 HSPH1Q92598 858 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 SNF8Q96H20 258 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 ADPGKQ9BRR6 497 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 PITPNM3Q9BZ71 974 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 LRP6O75581 1613 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 LAMB4A4D0S4 1761 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 CAND2O75155 1236 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 PYROXD1Q8WU10 500 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 INPP4AQ96PE3 977 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 MOV10L1Q9BXT6 1211 aaKnown RBP13.03□□□□□ -0.32
COL20A1-201ENST00000358894 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
COL20A1-201ENST00000358894 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 GGPS1O95749 300 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 INHBAP08476 426 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 CYP11B1P15538 503 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 CYP3A7P24462 503 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 ENOSF1Q7L5Y1 443 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.32
COL20A1-201ENST00000358894 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 GDF3Q9NR23 364 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 GINM1Q9NU53 330 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.32
COL20A1-201ENST00000358894 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms