RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NR1D2Q14995 579 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 GSTA3Q16772 222 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 STOX1Q6ZVD7 989 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.41□□□□□ -1.382e-7■■■■■ 102.3
VPS13B-203ENST00000358544 ZNF713Q8N859 430 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PRDM15P57071 1507 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 FESP07332 822 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 MAGEA4P43358 317 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 TBX2Q13207 712 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 LRRC8BQ6P9F7 803 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 PHACTR1Q9C0D0 580 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 MYO3BQ8WXR4 1341 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 RAPGEF6Q8TEU7 1601 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 GOLGA8RI6L899 631 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 TJP3O95049 919 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CEP78Q5JTW2 689 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 GUF1Q8N442 669 aaKnown RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 IL17REQ8NFR9 667 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 FAM81BQ96LP2 452 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 METTL5Q9NRN9 209 aaKnown RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 TMOD4Q9NZQ9 345 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 ARHGEF37A1IGU5 675 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 KPNA4O00629 521 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 PRKAB2O43741 272 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CBFA2T3O75081 653 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 COILP38432 576 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 NT5C2P49902 561 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 C9orf72Q96LT7 481 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 IPO11Q9UI26 975 aaKnown RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 ANAPC7Q9UJX3 599 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 ATP10DQ9P241 1426 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CFAP99D6REC4 459 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 PLEKHA8P1O95397 391 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 GSNP06396 782 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CLEC4GQ6UXB4 293 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 SPICE1Q8N0Z3 855 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 THEMISQ8N1K5 641 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 STKLD1Q8NE28 680 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CSRNP1Q96S65 589 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 LACRTQ9GZZ8 138 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 RAD21L1Q9H4I0 556 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 CLDN3O15551 220 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 S100A1P23297 94 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 SCNN1BP51168 640 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 ARPC4P59998 168 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 RGS21Q2M5E4 152 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 KLRF2D3W0D1 207 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 PRLRP16471 622 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 PSEN1P49768 467 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 NR1H2P55055 460 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
VPS13B-203ENST00000358544 ALCAMQ13740 583 aa6.4□□□□□ -1.38
VPS13B-203ENST00000358544 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 VAV1P15498 845 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 PHKA1P46020 1223 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 XRCC4Q13426 336 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 RDH13Q8NBN7 331 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 MRPS26Q9BYN8 205 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 TFR2Q9UP52 801 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 PHGDHO43175 533 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 KCNQ3O43525 872 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 SRP72O76094 671 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 CBX3Q13185 183 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 KIF19Q2TAC6 998 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 SEPT8Q92599 483 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 MYO7BQ6PIF6 2116 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 TNFAIP8O95379 198 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 RAPGEF3O95398 923 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 EIF2S1P05198 315 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 HSPA1AP0DMV8 641 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 HSPA1BP0DMV9 641 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ERVK-9P63128 1117 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 NDUFA5Q16718 116 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 GOLPH3Q9H4A6 298 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 MAP3K15Q6ZN16 1313 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 USP17L12C9JPN9 530 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 USP17L21D6R901 530 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 PRPSAP2O60256 369 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 CLASP2O75122 1294 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF18P17022 549 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 YWHAHQ04917 246 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 SLC12A1Q13621 1099 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ARMC3Q5W041 872 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 SCYL2Q6P3W7 929 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 RAPH1Q70E73 1250 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM120AQ9BXJ8 343 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 SLC52A2Q9HAB3 445 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 A6NJR5 290 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF839A8K0R7 811 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 PDE2AO00408 941 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 ADAM33Q9BZ11 813 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 CACYBPQ9HB71 228 aaKnown RBP6.4□□□□□ -1.39
VPS13B-203ENST00000358544 HEY2Q9UBP5 337 aa6.4□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM49P0CI25 452 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms