RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 FAM177A1Q8N128 213 aaPredicted RBP17.6■□□□□ 0.41
IFT20-202ENST00000357896 NFKBIZQ9BYH8 718 aa17.6■□□□□ 0.41
IFT20-202ENST00000357896 CHRDQ9H2X0 955 aa17.6■□□□□ 0.41
IFT20-202ENST00000357896 DNMT3BQ9UBC3 853 aaKnown RBP17.6■□□□□ 0.41
IFT20-202ENST00000357896 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
IFT20-202ENST00000357896 COL4A3Q01955 1670 aa17.6■□□□□ 0.41
IFT20-202ENST00000357896 A0A1B0GUA9 196 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 NPTXRO95502 500 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 TDGF1P13385 188 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 AMHR2Q16671 573 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 HASPINQ8TF76 798 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 ELSPBP1Q96BH3 223 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 PAAF1Q9BRP4 392 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 HCFC1R1Q9NWW0 138 aa17.59■□□□□ 0.41
IFT20-202ENST00000357896 M0R2N6 131 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 SLC37A4O43826 429 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 MARCH6O60337 910 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 KIF4AO95239 1232 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 CPA1P15085 419 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 OR1D2P34982 312 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 CCR3P51677 355 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 CSRP2Q16527 193 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 LPAL2Q16609 132 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 BLOC1S2Q6QNY1 142 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 PRR23BQ6ZRT6 265 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 DAGLBQ8NCG7 672 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 ING5Q8WYH8 240 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 BRD9Q9H8M2 597 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 AVENQ9NQS1 362 aaPredicted RBP17.58■□□□□ 0.4
IFT20-202ENST00000357896 SEMA4GQ9NTN9 838 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 RGL1Q9NZL6 768 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 USP24Q9UPU5 2620 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 CACNA1GO43497 2377 aa17.58■□□□□ 0.4
IFT20-202ENST00000357896 DOCK6Q96HP0 2047 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 CASTOR2A6NHX0 329 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 TBX3O15119 743 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 ADAM12O43184 909 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 DGAT1O75907 488 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 THP07101 528 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
IFT20-202ENST00000357896 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
IFT20-202ENST00000357896 INF2Q27J81 1249 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 TANGO2Q6ICL3 276 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
IFT20-202ENST00000357896 ZNF687Q8N1G0 1237 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 IRF7Q92985 503 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
IFT20-202ENST00000357896 PLA2G2FQ9BZM2 168 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 XPNPEP1Q9NQW7 623 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 CACNG4Q9UBN1 327 aa17.57■□□□□ 0.4
IFT20-202ENST00000357896 NDRG2Q9UN36 371 aaKnown RBP17.57■□□□□ 0.4
IFT20-202ENST00000357896 SHISA7A6NL88 538 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 ZBTB39O15060 712 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 B4GALT5O43286 388 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 RHOP08100 348 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 PTPN2P17706 415 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 CNR2P34972 360 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 ARL2P36404 184 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 CCT2P78371 535 aaKnown RBP17.56■□□□□ 0.4
IFT20-202ENST00000357896 DMWDQ09019 674 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 CAPSQ13938 189 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 SIM2Q14190 667 aaPredicted RBP17.56■□□□□ 0.4
IFT20-202ENST00000357896 PRR23CQ6ZRP0 262 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
IFT20-202ENST00000357896 TPH2Q8IWU9 490 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 DYDC2Q96IM9 177 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 TRMT61BQ9BVS5 477 aaKnown RBP17.56■□□□□ 0.4
IFT20-202ENST00000357896 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 LMAN1LQ9HAT1 526 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 ZFP14Q9HCL3 533 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 TRPV5Q9NQA5 729 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 ANGPTL2Q9UKU9 493 aa17.56■□□□□ 0.4
IFT20-202ENST00000357896 DEXIO95424 95 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
IFT20-202ENST00000357896 CXCL12P48061 93 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 CTTNQ14247 550 aaKnown RBP17.55■□□□□ 0.4
IFT20-202ENST00000357896 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 NCAPH2Q6IBW4 605 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 ASAP3Q8TDY4 903 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 FAM3CQ92520 227 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 PRIMPOLQ96LW4 560 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 NAP1L4Q99733 375 aaKnown RBP17.55■□□□□ 0.4
IFT20-202ENST00000357896 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
IFT20-202ENST00000357896 MTRRQ9UBK8 725 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 BACE2Q9Y5Z0 518 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 CDY1Q9Y6F8 540 aa17.55■□□□□ 0.4
IFT20-202ENST00000357896 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
IFT20-202ENST00000357896 MICAL2O94851 1124 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 SLITRK3O94933 977 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 LRG1P02750 347 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 FGFR3P22607 806 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 GLRA2P23416 452 aa17.54■□□□□ 0.4
IFT20-202ENST00000357896 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms