RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 TGFB1I1O43294 461 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 FAM189A1O60320 539 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 RECQL4O94761 1208 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 LINC00271P0C7V0 271 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 MLH1P40692 756 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 KNOP1Q1ED39 458 aaKnown RBP17.54■□□□□ 0.4
COPS7B-202ENST00000357490 TCEAL5Q5H9L2 206 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 ZBTB41Q5SVQ8 909 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 SLFN12LQ6IEE8 588 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 POMGNT1Q8WZA1 660 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 P2RX5Q93086 422 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 PABPC5Q96DU9 382 aaKnown RBP17.54■□□□□ 0.4
COPS7B-202ENST00000357490 MSTO1Q9BUK6 570 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 GBP3Q9H0R5 595 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 UBN1Q9NPG3 1134 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 TYW1Q9NV66 732 aaKnown RBP17.54■□□□□ 0.4
COPS7B-202ENST00000357490 MIOSQ9NXC5 875 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 FAM50BQ9Y247 325 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 GIT1Q9Y2X7 761 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
COPS7B-202ENST00000357490 PLXNA4Q9HCM2 1894 aa17.54■□□□□ 0.4
COPS7B-202ENST00000357490 BIN1O00499 593 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 OGTO15294 1046 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 MEFVO15553 781 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-202ENST00000357490 TNFSF9P41273 254 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 COL19A1Q14993 1142 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 NOMO2Q5JPE7 1267 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 ZNF658Q5TYW1 1059 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-202ENST00000357490 GSTCDQ8NEC7 633 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 ACAP3Q96P50 834 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 CBWD1Q9BRT8 395 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 CCDC94Q9BW85 323 aaPredicted RBP17.53■□□□□ 0.4
COPS7B-202ENST00000357490 NUP62CLQ9H1M0 184 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 PCIF1Q9H4Z3 704 aa17.53■□□□□ 0.4
COPS7B-202ENST00000357490 AGO2Q9UKV8 859 aaKnown RBP17.53■□□□□ 0.4
COPS7B-202ENST00000357490 POMCP01189 267 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 COL9A1P20849 921 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 PRCPP42785 496 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 PTCRAQ6ISU1 281 aaPredicted RBP17.52■□□□□ 0.4
COPS7B-202ENST00000357490 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.52■□□□□ 0.4
COPS7B-202ENST00000357490 KCTD10Q9H3F6 313 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 CWH43Q9H720 699 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 TBC1D13Q9NVG8 400 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 KIAA1468Q9P260 1216 aa17.52■□□□□ 0.4
COPS7B-202ENST00000357490 CLIC2O15247 247 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 GRM6O15303 877 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 INPPL1O15357 1258 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 MBD3O95983 291 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 CLTAP09496 248 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 BMP6P22004 513 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 GARTP22102 1010 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 ACOT2P49753 483 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 SCNN1GP51170 649 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 YARSP54577 528 aaKnown RBP17.51■□□□□ 0.39
COPS7B-202ENST00000357490 MORC3Q14149 939 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 SLC10A6Q3KNW5 377 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 ALKAL1Q6UXT8 129 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 EP400NLQ6ZTU2 488 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 ZNF280BQ86YH2 543 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 LRRC43Q8N309 656 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 GUF1Q8N442 669 aaKnown RBP17.51■□□□□ 0.39
COPS7B-202ENST00000357490 URGCPQ8TCY9 931 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 PPP2R3CQ969Q6 453 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 AGPAT3Q9NRZ7 376 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 KANSL3Q9P2N6 904 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 CPSF3Q9UKF6 684 aaKnown RBP17.51■□□□□ 0.39
COPS7B-202ENST00000357490 PLAGL2Q9UPG8 496 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 TRIP11Q15643 1979 aa17.51■□□□□ 0.39
COPS7B-202ENST00000357490 C5orf42Q9H799 3197 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 GRXCR2A6NFK2 248 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 PTGESO14684 152 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 B4GALT3O60512 393 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 DDHD2O94830 711 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 CXCL8P10145 99 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 SPOUT1Q5T280 376 aaKnown RBP17.5■□□□□ 0.39
COPS7B-202ENST00000357490 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
COPS7B-202ENST00000357490 HS2ST1Q7LGA3 356 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 RPS6KC1Q96S38 1066 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 FAM213AQ9BRX8 229 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 MRPL9Q9BYD2 267 aaKnown RBP17.5■□□□□ 0.39
COPS7B-202ENST00000357490 NRDE2Q9H7Z3 1164 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 CLDND1Q9NY35 253 aa17.5■□□□□ 0.39
COPS7B-202ENST00000357490 TDRD15B5MCY1 1934 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 H3BQ06 376 aaPredicted RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 KIF20AO95235 890 aa17.49■□□□□ 0.39
COPS7B-202ENST00000357490 CD44P16070 742 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 SNRPFP62306 86 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 RNASELQ05823 741 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 ENOX2Q16206 610 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 KYAT1Q16773 422 aa17.49■□□□□ 0.39
COPS7B-202ENST00000357490 XKR4Q5GH76 650 aa17.49■□□□□ 0.39
COPS7B-202ENST00000357490 GLRA4Q5JXX5 417 aa17.49■□□□□ 0.39
COPS7B-202ENST00000357490 NOC3LQ8WTT2 800 aaKnown RBP17.49■□□□□ 0.39
COPS7B-202ENST00000357490 RSPH1Q8WYR4 309 aa17.49■□□□□ 0.39
COPS7B-202ENST00000357490 SNX27Q96L92 541 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms