RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 COL4A6Q14031 1691 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 TTC26A0AVF1 554 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 KCNJ18B7U540 433 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 FGFR1OPO95684 399 aaKnown RBP27.58■■■□□ 2.01
SSBP3-202ENST00000357475 ACTN1P12814 892 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 MLH1P40692 756 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 KCNJ12Q14500 433 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 CLLU1OSQ5K130 101 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 C1orf220Q5T0J3 134 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 ALKAL1Q6UXT8 129 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 GAD1Q99259 594 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 TOPORSQ9NS56 1045 aaPredicted RBP27.58■■■□□ 2.01
SSBP3-202ENST00000357475 TMEM161AQ9NX61 479 aa27.58■■■□□ 2.01
SSBP3-202ENST00000357475 BAIAP3O94812 1187 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 UPP2O95045 317 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 TRIM49P0CI25 452 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 TRIM49CP0CI26 452 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 SKIP12755 728 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 FNDC1Q4ZHG4 1894 aaPredicted RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 GLRA4Q5JXX5 417 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 C9orf50Q5SZB4 431 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 LMBRD2Q68DH5 695 aaPredicted RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 PSRC1Q6PGN9 363 aaPredicted RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 ZMAT2Q96NC0 199 aaKnown RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 MIOSQ9NXC5 875 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 ZBBXA8MT70 800 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 MAPK13O15264 365 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 EOMESO95936 686 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 MARSP56192 900 aaKnown RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 PSMD6Q15008 389 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 KYAT1Q16773 422 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 TCP11X2Q5H9J9 407 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 FRMD5Q7Z6J6 570 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 EFCAB13Q8IY85 973 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 GSTCDQ8NEC7 633 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 ARMCX3Q9UH62 379 aaPredicted RBP27.57■■■□□ 2
SSBP3-202ENST00000357475 PLAGL2Q9UPG8 496 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 PCDHB7Q9Y5E2 793 aa27.57■■■□□ 2
SSBP3-202ENST00000357475 TDRD15B5MCY1 1934 aaKnown RBP27.56■■■□□ 2
SSBP3-202ENST00000357475 LRRIQ3A6PVS8 624 aaPredicted RBP27.56■■■□□ 2
SSBP3-202ENST00000357475 DLATP10515 647 aaKnown RBP27.56■■■□□ 2
SSBP3-202ENST00000357475 VAMP7P51809 220 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 BFSP1Q12934 665 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 FAM117BQ6P1L5 589 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 TRIM59Q8IWR1 403 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 HELQQ8TDG4 1101 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 PARD3BQ8TEW8 1205 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 HERVK_113Q902F9 699 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 PGBD4Q96DM1 585 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 ELAC1Q9H777 363 aaKnown RBP27.56■■■□□ 2
SSBP3-202ENST00000357475 RSAD1Q9HA92 442 aa27.56■■■□□ 2
SSBP3-202ENST00000357475 ARL5CA6NH57 179 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 GOLGA6L19H0YKK7 550 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 PTGESO14684 152 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 OFD1O75665 1012 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 NFICP08651 508 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 YARSP54577 528 aaKnown RBP27.55■■■□□ 2
SSBP3-202ENST00000357475 DCAF17Q5H9S7 520 aaPredicted RBP27.55■■■□□ 2
SSBP3-202ENST00000357475 SCARA3Q6AZY7 606 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 JADE1Q6IE81 842 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 INTS8Q75QN2 995 aaKnown RBP27.55■■■□□ 2
SSBP3-202ENST00000357475 NPAS4Q8IUM7 802 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 HACE1Q8IYU2 909 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 LRFN2Q9ULH4 789 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 INPP5FQ9Y2H2 1132 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 GIT1Q9Y2X7 761 aa27.55■■■□□ 2
SSBP3-202ENST00000357475 GNA14O95837 355 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 AMHP03971 560 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 PPP2R3AQ06190 1150 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 KRT31Q15323 416 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 XKR4Q5GH76 650 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 FAM43BQ6ZT52 329 aaPredicted RBP27.54■■■□□ 2
SSBP3-202ENST00000357475 APTXQ7Z2E3 356 aaKnown RBP27.54■■■□□ 2
SSBP3-202ENST00000357475 ZNF516Q92618 1163 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 TAB2Q9NYJ8 693 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 CNTN3Q9P232 1028 aa27.54■■■□□ 2
SSBP3-202ENST00000357475 MAGEC2Q9UBF1 373 aaPredicted RBP27.54■■■□□ 2
SSBP3-202ENST00000357475 PDE4DIPQ5VU43 2346 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 EFCAB14O75071 495 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 KRT13P13646 458 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 MTIF2P46199 727 aaKnown RBP27.53■■■□□ 2
SSBP3-202ENST00000357475 SCNN1GP51170 649 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 FAM114A1Q8IWE2 563 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 OR5B17Q8NGF7 314 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 TOP1MTQ969P6 601 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 SLC35C1Q96A29 364 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 GDF15Q99988 308 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 MMRN2Q9H8L6 949 aa27.53■■■□□ 2
SSBP3-202ENST00000357475 SMIM28A0A1B0GU29 152 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 IL18RAPO95256 599 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 POMCP01189 267 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 KCNJ6P48051 423 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 PPP3CAQ08209 521 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 SHHQ15465 462 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 TCERG1LQ5VWI1 586 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 TMC2Q8TDI7 906 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 C18orf25Q96B23 403 aaPredicted RBP27.52■■■□□ 2
SSBP3-202ENST00000357475 PLEKHA5Q9HAU0 1116 aa27.52■■■□□ 2
SSBP3-202ENST00000357475 METTL14Q9HCE5 456 aaKnown RBP27.52■■■□□ 2
SSBP3-202ENST00000357475 CDK11BP21127 795 aaKnown RBP27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms