RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 BRAFP15056 766 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RGS7P49802 495 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 YIPF3Q9GZM5 350 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 DNAJC12Q9UKB3 198 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 SERPINB3P29508 390 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 ANO5Q75V66 913 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 ITIH6Q6UXX5 1313 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 BCAR1P56945 870 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 PDIA2Q13087 525 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 APOL1O14791 398 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 ENO1P06733 434 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RARBP10826 455 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 KDSRQ06136 332 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 UBE2Q2Q8WVN8 375 aa18.16■□□□□ 0.5
COL27A1-201ENST00000356083 RBM41Q96IZ5 413 aaKnown RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-201ENST00000356083 BBOX1O75936 387 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 APBA1Q02410 837 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 PAN2Q504Q3 1202 aaKnown RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 IPCEF1Q8WWN9 437 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 ARHGEF10O15013 1369 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 STKLD1Q8NE28 680 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 ASAP3Q8TDY4 903 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 SLC30A1Q9Y6M5 507 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 NBPF26B4DH59 902 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 ZBED8Q8IZ13 594 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 ZNF304Q9HCX3 659 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 PODXLO00592 558 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 GRK2P25098 689 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 DPCR1Q3MIW9 517 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 NFICP08651 508 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 RNF103O00237 685 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 CALB1P05937 261 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 SH3RF3Q8TEJ3 882 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 EXO5Q9H790 373 aa18.15■□□□□ 0.5
COL27A1-201ENST00000356083 RPRD1BQ9NQG5 326 aaKnown RBP18.15■□□□□ 0.5
COL27A1-201ENST00000356083 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.5
COL27A1-201ENST00000356083 GRAP2O75791 330 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 RARS2Q5T160 578 aaKnown RBP18.14■□□□□ 0.49
COL27A1-201ENST00000356083 TEDDM1Q5T9Z0 273 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 KRT39Q6A163 491 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 SPATA18Q8TC71 538 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 CTIFO43310 598 aaKnown RBP18.14■□□□□ 0.49
COL27A1-201ENST00000356083 PCP11498 1178 aaKnown RBP18.14■□□□□ 0.49
COL27A1-201ENST00000356083 GPR1P46091 355 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 POLR3FQ9H1D9 316 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-201ENST00000356083 OSGEPL1Q9H4B0 414 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 SLC39A10Q9ULF5 831 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 PGK2P07205 417 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 CLK1P49759 484 aaKnown RBP18.14■□□□□ 0.49
COL27A1-201ENST00000356083 JAK3P52333 1124 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 GUCY1A3Q02108 690 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 GALNT8Q9NY28 637 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 ZSWIM5Q9P217 1185 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 PKD2L2Q9NZM6 624 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 IQCMA0A1B0GVH7 501 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 LRG1P02750 347 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 VAMP7P51809 220 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 SARM1Q6SZW1 724 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 BRIP1Q9BX63 1249 aa18.14■□□□□ 0.49
COL27A1-201ENST00000356083 ARF5P84085 180 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 GALNT4Q8N4A0 578 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 POMGNT2Q8NAT1 580 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 CRKP46108 304 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 MAGOHP61326 146 aaKnown RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 SENP2Q9HC62 589 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 GPC5P78333 572 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 GFPT1Q06210 699 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 RUNX1T1Q06455 604 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 BFSP2Q13515 415 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 MIIPQ5JXC2 388 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 THTPAQ9BU02 230 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 NSMCE4AQ9NXX6 385 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 BFARQ9NZS9 450 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 NUP62P37198 522 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 PHACTR4Q8IZ21 702 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 DYRK3O43781 588 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 MTM1Q13496 603 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 BNIPLQ7Z465 357 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 CCDC60Q8IWA6 550 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-201ENST00000356083 LCORLQ8N3X6 602 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 SH2D3AQ9BRG2 576 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 ENDOD1O94919 500 aa18.13■□□□□ 0.49
COL27A1-201ENST00000356083 CHI3L1P36222 383 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms