RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GOLGA8MH3BSY2 632 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 NOP56O00567 594 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ABLIM1O14639 778 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ECM2O94769 699 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 BMP6P22004 513 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 BSPRYQ5W0U4 402 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 C16orf89Q6UX73 402 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 NSMFQ6X4W1 530 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FBXL13Q8NEE6 735 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 APBB2Q92870 758 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TLR10Q9BXR5 811 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FRMD8P1Q9BZ68 369 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CDC42EP4Q9H3Q1 356 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SLC9A2Q9UBY0 812 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 MCM8Q9UJA3 840 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 L3MBTL1Q9Y468 752 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 BTNL10A8MVZ5 291 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CLDN3O15551 220 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TAF1BQ53T94 588 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 STK32AQ8WU08 396 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FAM210AQ96ND0 272 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SENP2Q9HC62 589 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TBC1D22BQ9NU19 505 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ESYT2A0FGR8 921 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ZBED1O96006 694 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 AP1B1Q10567 949 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 MORF4L2Q15014 288 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SPDYE1Q8NFV5 336 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PICK1Q9NRD5 415 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 N4BP2Q86UW6 1770 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PFDN6O15212 129 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ATP5BP06576 529 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PAMP19021 973 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 AMPD2Q01433 879 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PKN1Q16512 942 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 RSBN1LQ6PCB5 846 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TRPV6Q9H1D0 765 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 MRPL46Q9H2W6 279 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PIK3C2AO00443 1686 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L5A8MUK1 530 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ZFXP17010 805 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 OSBPP22059 807 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PMS1P54277 932 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 YARSP54577 528 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 XRCC4Q13426 336 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 DNAAF3Q8N9W5 541 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 EPS8L3Q8TE67 593 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ADPGKQ9BRR6 497 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SLC13A1Q9BZW2 595 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CORO1CQ9ULV4 474 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TTLL3Q9Y4R7 772 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 NBPF26B4DH59 902 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 H3BRJ5 948 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PIK3R2O00459 728 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ITGA8P53708 1063 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 HDAC4P56524 1084 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ROR1Q01973 937 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TRADDQ15628 312 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 FOXR2Q6PJQ5 311 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 NBPF15Q8N660 670 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM35BQ8NCS4 154 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CCDC124Q96CT7 223 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 EML4Q9HC35 981 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 ASNSD1Q9NWL6 643 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CCNL1Q9UK58 526 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 NALCNQ8IZF0 1738 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 PSTPIP1O43586 416 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 MAGEA4P43358 317 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 RIPK1Q13546 671 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 HSPH1Q92598 858 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 KCNK16Q96T55 309 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 CYP4F11Q9HBI6 524 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 SEPT10Q9P0V9 454 aa5.06□□□□□ -1.6
CSMD3-203ENST00000343508 XPO7Q9UIA9 1087 aaKnown RBP5.06□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L15C9J2P7 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L13C9JLJ4 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L11C9JVI0 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L18D6R9N7 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L22D6RA61 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L17D6RBQ6 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L19D6RCP7 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L20D6RJB6 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 GNGT2O14610 69 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ARL4AP40617 200 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ARHGDIAP52565 204 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L24Q0WX57 530 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PPP2R5CQ13362 524 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 OLFML2BQ68BL8 750 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 USP17L6PQ6QN14 398 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PRPF39Q86UA1 669 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 AS3MTQ9HBK9 375 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 SMYD2Q9NRG4 433 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM260Q9NX78 707 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PEAK1Q9H792 1746 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 UNC5CO95185 931 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 P4HBP07237 508 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 PBX1P40424 430 aa5.05□□□□□ -1.6
CSMD3-203ENST00000343508 THOC5Q13769 683 aaKnown RBP5.05□□□□□ -1.6
CSMD3-203ENST00000343508 ZYXQ15942 572 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms