RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TGFB1I1O43294 461 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 LINC00271P0C7V0 271 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 ENOX2Q16206 610 aaKnown RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 KLHL23Q8NBE8 558 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 GSTCDQ8NEC7 633 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 PPM1EQ8WY54 764 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 SNX27Q96L92 541 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 NUP62CLQ9H1M0 184 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 RPF1Q9H9Y2 349 aaKnown RBP14.39□□□□□ -0.11
TUBD1-202ENST00000340993 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 SLC11A1P49279 550 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 WNT7BP56706 349 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 KCNT2Q6UVM3 1135 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 UBN1Q9NPG3 1134 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 HSPBP1Q9NZL4 362 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
TUBD1-202ENST00000340993 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 GRM6O15303 877 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 FAM189A1O60320 539 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 THP07101 528 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 IGFBP6P24592 240 aaPredicted RBP14.38□□□□□ -0.11
TUBD1-202ENST00000340993 ABCD1P33897 745 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 BMPR1AP36894 532 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 PRCPP42785 496 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 ERVK-21P61565 698 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 PPP2R3AQ06190 1150 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 PSMD2Q13200 908 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 GPM6BQ13491 265 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 KCNB1Q14721 858 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 HS2ST1Q7LGA3 356 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 CBWD2Q8IUF1 395 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 BCL7CQ8WUZ0 217 aaPredicted RBP14.38□□□□□ -0.11
TUBD1-202ENST00000340993 ZNF558Q96NG5 402 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 GUCD1Q96NT3 240 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
TUBD1-202ENST00000340993 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
TUBD1-202ENST00000340993 PCDHB12Q9Y5F1 795 aa14.38□□□□□ -0.11
TUBD1-202ENST00000340993 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 TRIM49BA6NDI0 452 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 NFICP08651 508 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CLTAP09496 248 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 BMP6P22004 513 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 ALDH7A1P49419 539 aaKnown RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 STX17P56962 302 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 ADGRE1Q14246 886 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 ZNF658Q5TYW1 1059 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 SLFN12LQ6IEE8 588 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CRELD2Q6UXH1 353 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 GSDMAQ96QA5 445 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 RBAKQ9NYW8 714 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CTNND2Q9UQB3 1225 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 UBE4BO95155 1302 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 ITGB1P05556 798 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 GALTP07902 379 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 LAG3P18627 525 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 DNAJB1P25685 340 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 GRIK3Q13003 919 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 BMT2Q1RMZ1 405 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 COLGALT2Q8IYK4 626 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 B3GALT6Q96L58 329 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 KCTD10Q9H3F6 313 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 KIAA1468Q9P260 1216 aa14.37□□□□□ -0.11
TUBD1-202ENST00000340993 CPSF3Q9UKF6 684 aaKnown RBP14.37□□□□□ -0.11
TUBD1-202ENST00000340993 NRP1O14786 923 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 EXOC3O60645 756 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 FGF18O76093 207 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 NR3C1P04150 777 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 SCP2P22307 547 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
TUBD1-202ENST00000340993 CAVIN1Q6NZI2 390 aaKnown RBP14.36□□□□□ -0.11
TUBD1-202ENST00000340993 GPD1LQ8N335 351 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 AUTS2Q8WXX7 1259 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 PDE11AQ9HCR9 933 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 AAASQ9NRG9 546 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 STYXL1Q9Y6J8 313 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 SCN1AP35498 2009 aa14.36□□□□□ -0.11
TUBD1-202ENST00000340993 I3L4J1 428 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 EXTL3O43909 919 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 ADRB2P07550 413 aa14.35□□□□□ -0.11
TUBD1-202ENST00000340993 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
TUBD1-202ENST00000340993 FOSL2P15408 326 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms