RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ESYT3A0FGR9 886 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GOLGA8IPA6NC78 632 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ERICH4A6NGS2 130 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GOLGA8JA6NMD2 632 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TULP2O00295 520 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GLRA2P23416 452 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PTGIRP43119 386 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CENPCQ03188 943 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 STRN3Q13033 797 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 AGBL2Q5U5Z8 902 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TMC3Q7Z5M5 1100 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF564Q8TBZ8 553 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 KIFC3Q9BVG8 833 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 C1orf112Q9NSG2 853 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZDHHC18Q9NUE0 388 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SCAF8Q9UPN6 1271 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 EIF3HO15372 352 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FARP2O94887 1054 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MMEP08473 750 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NUDT17P0C025 328 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HSD17B3P37058 310 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 LIG4P49917 911 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 IRAK1P51617 712 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SP2Q02086 613 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CDCA2Q69YH5 1023 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CRELD2Q6UXH1 353 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CROCCP2Q86T23 111 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MAIP1Q8WWC4 291 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ARL8AQ96BM9 186 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CGRRF1Q99675 332 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CAPS2Q9BXY5 557 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NRBP2Q9NSY0 501 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GRIN2DO15399 1336 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MAFO75444 373 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 LGR5O75473 907 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ACO1P21399 889 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 DNA2P51530 1060 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 EFNA5P52803 228 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 DR1Q01658 176 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 UAP1Q16222 522 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SEL1L2Q5TEA6 688 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FAM160B1Q5W0V3 765 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ARFGAP2Q8N6H7 521 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 C3orf20Q8ND61 904 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 AGO2Q9UKV8 859 aaKnown RBP11.5□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 GSTTP1A0A1W2PQM5 241 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TTI1O43156 1089 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SLC25A27O95847 323 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 COMTP21964 271 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MRPS25P82663 173 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 UBR7Q8N806 425 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CCDC127Q96BQ5 260 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MPHOSPH6Q99547 160 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SH2D3AQ9BRG2 576 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TMEM109Q9BVC6 243 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SEPT11Q9NVA2 429 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 IGKV6-21A0A0C4DH24 114 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CXCL11O14625 94 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FSCN2O14926 492 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ADCY3O60266 1144 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 UBA1P22314 1058 aaKnown RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MAN1A1P33908 653 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 RWDD2BP57060 319 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SIX1Q15475 284 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SURF1Q15526 300 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SLC13A5Q86YT5 568 aaPredicted RBP11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PCYT2Q99447 389 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 FAM213AQ9BRX8 229 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CCDC113Q9H0I3 377 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 NEUROG2Q9H2A3 272 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ERLIN2O94905 339 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 SLC26A2P50443 739 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 ZNF132P52740 706 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 HLTFQ14527 1009 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 TRADDQ15628 312 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PLPPR4Q7Z2D5 763 aa11.48□□□□□ -0.57
TRAF3IP2-201ENST00000340026 PHF13Q86YI8 300 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms