RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 RGS20O76081 388 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 IL32P24001 234 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 CLK1P49759 484 aaKnown RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 GJA9P57773 515 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 RBM20Q5T481 1227 aaKnown RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 STK32CQ86UX6 486 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 PM20D2Q8IYS1 436 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 SDR16C5Q8N3Y7 309 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 TSPAN14Q8NG11 270 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 KCTD4Q8WVF5 259 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 L3MBTL3Q96JM7 780 aaPredicted RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 TBC1D10AQ9BXI6 508 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 ADGRF5Q8IZF2 1346 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 LPXNO60711 386 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 FGFR4P22455 802 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 GNG2P59768 71 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 PLIN5Q00G26 463 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 KRT73Q86Y46 540 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 HEY2Q9UBP5 337 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 WDR7Q9Y4E6 1490 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 A0A1W2PQ72 361 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 MAGEB16A2A368 324 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 PMLP29590 882 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 TRAF2Q12933 501 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 BFSP1Q12934 665 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 NIPAL1Q6NVV3 410 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 TLDC1Q6P9B6 456 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 NET1Q7Z628 596 aaPredicted RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 CCNJLQ8IV13 435 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 CHP1Q99653 195 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 MYLK2Q9H1R3 596 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 KIAA1586Q9HCI6 787 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 DCDC2Q9UHG0 476 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
BRPF3-201ENST00000339717 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 UQCRBP14927 111 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 NSFP46459 744 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SERPINH1P50454 418 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 RTP1P59025 263 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 FAPQ12884 760 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ALKBH5Q6P6C2 394 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SAYSD1Q9NPB0 183 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PCDH12Q9NPG4 1184 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 CYP2C9P11712 490 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 COPAP53621 1224 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ALDH18A1P54886 795 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SYDE1Q6ZW31 735 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 BEST2Q8NFU1 509 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 FOXP3Q9BZS1 431 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF304Q9HCX3 659 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 HPS5Q9UPZ3 1129 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 TMEM98Q9Y2Y6 226 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 LRRC42Q9Y546 428 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 LINC00854A0A1B0GVQ3 168 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 F8W810 466 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 H7C1W4 665 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SNPHO15079 494 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PSTPIP1O43586 416 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 IREB2P48200 963 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SETD3Q86TU7 594 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SYTL5Q8TDW5 730 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PAGE5Q96GU1 130 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SNF8Q96H20 258 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 RNF38Q9H0F5 515 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 GDF3Q9NR23 364 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ADA2Q9NZK5 511 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF221Q9UK13 617 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ADGRL3Q9HAR2 1447 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF233A6NK53 670 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 RXRAP19793 462 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 ADSLP30566 484 aaPredicted RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PTK2Q05397 1052 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 LONRF1Q17RB8 773 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 PRPF39Q86UA1 669 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 MYO1HQ8N1T3 1032 aa13.3□□□□□ -0.28
BRPF3-201ENST00000339717 TSEN2Q8NCE0 465 aaKnown RBP13.3□□□□□ -0.28
BRPF3-201ENST00000339717 SH3KBP1Q96B97 665 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms