RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 TNFSF9P41273 254 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 BCAR1P56945 870 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 ADGRE1Q14246 886 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 ALKAL1Q6UXT8 129 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 NELFCDQ8IXH7 590 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 COLGALT2Q8IYK4 626 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
SRSF3-201ENST00000339436 FAM193BQ96PV7 902 aaPredicted RBP14.01□□□□□ -0.17
SRSF3-201ENST00000339436 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 CBWD1Q9BRT8 395 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 TMEM175Q9BSA9 504 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 RMND1Q9NWS8 449 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 CNTN3Q9P232 1028 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
SRSF3-201ENST00000339436 PCDHA5Q9Y5H7 936 aa14.01□□□□□ -0.17
SRSF3-201ENST00000339436 GOLGA6L22H0YM25 854 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 TGFB1I1O43294 461 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ITGB1P05556 798 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 SLC11A1P49279 550 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 TUSC3Q13454 348 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 GPM6BQ13491 265 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 NAB2Q15742 525 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ENOX2Q16206 610 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 KNOP1Q1ED39 458 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 SLC10A6Q3KNW5 377 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ARMCX5Q6P1M9 558 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 HS2ST1Q7LGA3 356 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 TMEM173Q86WV6 379 aaPredicted RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 SLC39A11Q8N1S5 342 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 SMARCE1Q969G3 411 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 PPP1R10Q96QC0 940 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 GAS2L1Q99501 681 aaPredicted RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 AGPAT3Q9NRZ7 376 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 CPSF3Q9UKF6 684 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 SPTBN5Q9NRC6 3674 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 TTC26A0AVF1 554 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 FGF18O76093 207 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 THP07101 528 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 GALTP07902 379 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 KCNE1P15382 129 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 FOSL2P15408 326 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ACOT2P49753 483 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 SNRPFP62306 86 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 PPP2R3AQ06190 1150 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 RPF1Q9H9Y2 349 aaKnown RBP14□□□□□ -0.17
SRSF3-201ENST00000339436 PLEKHA5Q9HAU0 1116 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 SPG21Q9NZD8 308 aa14□□□□□ -0.17
SRSF3-201ENST00000339436 TSC2P49815 1807 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 KIAA0391O15091 583 aaKnown RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 GRM6O15303 877 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 POU3F3P20264 500 aaPredicted RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 PLCB3Q01970 1234 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 CRELD2Q6UXH1 353 aaPredicted RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 ZSWIM2Q8NEG5 633 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 GOLGA5Q8TBA6 731 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 BCL7CQ8WUZ0 217 aaPredicted RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 SAAL1Q96ER3 474 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 LMAN2LQ9H0V9 348 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 ALG13Q9NP73 1137 aaKnown RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 SLC38A7Q9NVC3 462 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 MARCH5Q9NX47 278 aa13.99□□□□□ -0.17
SRSF3-201ENST00000339436 CGNQ9P2M7 1197 aaKnown RBP13.99□□□□□ -0.17
SRSF3-201ENST00000339436 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 NT5C1B-RDH14C9J2C7 533 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 EXTL3O43909 919 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 KIF20AO95235 890 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 ADRB2P07550 413 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 UBE3AQ05086 875 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 ZNF658Q5TYW1 1059 aaPredicted RBP13.98□□□□□ -0.17
SRSF3-201ENST00000339436 BRSK2Q8IWQ3 736 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
SRSF3-201ENST00000339436 GUF1Q8N442 669 aaKnown RBP13.98□□□□□ -0.17
SRSF3-201ENST00000339436 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 MRPL38Q96DV4 380 aaKnown RBP13.98□□□□□ -0.17
SRSF3-201ENST00000339436 TMEM169Q96HH4 297 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 IGSF21Q96ID5 467 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 PCIF1Q9H4Z3 704 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 CACNG4Q9UBN1 327 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 MAN1B1Q9UKM7 699 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 PRG3Q9Y2Y8 225 aaPredicted RBP13.98□□□□□ -0.17
SRSF3-201ENST00000339436 MTCH2Q9Y6C9 303 aa13.98□□□□□ -0.17
SRSF3-201ENST00000339436 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
SRSF3-201ENST00000339436 NRP1O14786 923 aa13.97□□□□□ -0.17
SRSF3-201ENST00000339436 LDHAP00338 332 aaKnown RBP13.97□□□□□ -0.17
SRSF3-201ENST00000339436 IGFBP4P22692 258 aa13.97□□□□□ -0.17
SRSF3-201ENST00000339436 DNAJB1P25685 340 aa13.97□□□□□ -0.17
SRSF3-201ENST00000339436 OR1G1P47890 313 aa13.97□□□□□ -0.17
SRSF3-201ENST00000339436 SOX4Q06945 474 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms