RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ARNTL2Q8WYA1 636 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 FAM161BQ96MY7 647 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
SFN-201ENST00000339276 CNTN3Q9P232 1028 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 DNAJB4Q9UDY4 337 aa18.22■□□□□ 0.51
SFN-201ENST00000339276 TTC26A0AVF1 554 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 EPOPA6NHQ4 379 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 PDXKO00764 312 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 EXTL3O43909 919 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
SFN-201ENST00000339276 LAG3P18627 525 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 BMPR1AP36894 532 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 NAB2Q15742 525 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 Q7L0L9 218 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 C12orf56Q8IXR9 622 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 ADSSL1Q8N142 457 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 GPD1LQ8N335 351 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 TRIML1Q8N9V2 468 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 GOLGA5Q8TBA6 731 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 ZMAT2Q96NC0 199 aaKnown RBP18.21■□□□□ 0.51
SFN-201ENST00000339276 PPP1R10Q96QC0 940 aaKnown RBP18.21■□□□□ 0.51
SFN-201ENST00000339276 GTPBP4Q9BZE4 634 aaKnown RBP18.21■□□□□ 0.51
SFN-201ENST00000339276 SEMA6BQ9H3T3 888 aa18.21■□□□□ 0.51
SFN-201ENST00000339276 CGNQ9P2M7 1197 aaKnown RBP18.21■□□□□ 0.51
SFN-201ENST00000339276 SMIM28A0A1B0GU29 152 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 LACTBL1A8MY62 500 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
SFN-201ENST00000339276 LDHAP00338 332 aaKnown RBP18.2■□□□□ 0.5
SFN-201ENST00000339276 THP07101 528 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 KCNE1P15382 129 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 WNT7BP56706 349 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 BCAR1P56945 870 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 SPAG1Q07617 926 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 DSC1Q08554 894 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 GPR153Q6NV75 609 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 KCNT2Q6UVM3 1135 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 CBWD2Q8IUF1 395 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 COLGALT2Q8IYK4 626 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 FBXO22Q8NEZ5 403 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 FAM212AQ96EL1 285 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 SAMD11Q96NU1 681 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 FAM193BQ96PV7 902 aaPredicted RBP18.2■□□□□ 0.5
SFN-201ENST00000339276 CACNG4Q9UBN1 327 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
SFN-201ENST00000339276 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 CDH23Q9H251 3354 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 NT5C1B-RDH14C9J2C7 533 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 RFXAPO00287 272 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 CALUO43852 315 aaPredicted RBP18.19■□□□□ 0.5
SFN-201ENST00000339276 NR3C1P04150 777 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 ADRB2P07550 413 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 SLC11A1P49279 550 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 TUSC3Q13454 348 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 GRIN2CQ14957 1233 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 CCDC183Q5T5S1 534 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 BRSK2Q8IWQ3 736 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 PLEKHA5Q9HAU0 1116 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 AAASQ9NRG9 546 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 RBAKQ9NYW8 714 aaPredicted RBP18.19■□□□□ 0.5
SFN-201ENST00000339276 TMEM63CQ9P1W3 806 aa18.19■□□□□ 0.5
SFN-201ENST00000339276 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 TRIM49BA6NDI0 452 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 CASTOR2A6NHX0 329 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 PPP1R3GB7ZBB8 358 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 EXOC3O60645 756 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 GALTP07902 379 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 PMS1P54277 932 aaKnown RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 STIM1Q13586 685 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 JADE1Q6IE81 842 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 CENPPQ6IPU0 288 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 KLHL10Q6JEL2 608 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 RBM43Q6ZSC3 357 aaKnown RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 TMEM173Q86WV6 379 aaPredicted RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 TMEM130Q8N3G9 435 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 GDPD5Q8WTR4 605 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 RABGGTAQ92696 567 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 C18orf25Q96B23 403 aaPredicted RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 KIF12Q96FN5 646 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 FBXL18Q96ME1 805 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 PAAF1Q9BRP4 392 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 TMEM175Q9BSA9 504 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 PRDM12Q9H4Q4 367 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 DMAC2Q9NW81 257 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 PRG3Q9Y2Y8 225 aaPredicted RBP18.18■□□□□ 0.5
SFN-201ENST00000339276 PCDHB12Q9Y5F1 795 aa18.18■□□□□ 0.5
SFN-201ENST00000339276 ZNF233A6NK53 670 aa18.17■□□□□ 0.5
SFN-201ENST00000339276 F8W810 466 aa18.17■□□□□ 0.5
SFN-201ENST00000339276 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
SFN-201ENST00000339276 NRP1O14786 923 aa18.17■□□□□ 0.5
SFN-201ENST00000339276 PSMA7O14818 248 aa18.17■□□□□ 0.5
SFN-201ENST00000339276 NFICP08651 508 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms