RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 C1orf220Q5T0J3 134 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ECHDC2Q86YB7 292 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 MAGEB18Q96M61 343 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 PAIP2Q9BPZ3 127 aaKnown RBP25.21■■□□□ 1.63
TSKU-201ENST00000333090 NINJ2Q9NZG7 142 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 LY75O60449 1722 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 BMP3P12645 472 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ADCY8P40145 1251 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ANKLE1Q8NAG6 615 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 PLEKHO2Q8TD55 490 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 SLC5A5Q92911 643 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 STRA6Q9BX79 667 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 UNC45AQ9H3U1 944 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 KCND2Q9NZV8 630 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 UVRAGQ9P2Y5 699 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ANAPC5Q9UJX4 755 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 NAALADL1Q9UQQ1 740 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 THSD7AQ9UPZ6 1657 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ATF2P15336 505 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ANKRD20A2Q5SQ80 823 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ANKRD20A1Q5TYW2 823 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ANKRD20A3Q5VUR7 823 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 KCNV2Q8TDN2 545 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 PITPNM3Q9BZ71 974 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 TMEM117Q9H0C3 514 aa25.21■■□□□ 1.63
TSKU-201ENST00000333090 ADAMTSL1Q8N6G6 1762 aa25.2■■□□□ 1.63
TSKU-201ENST00000333090 P4HA2O15460 535 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 MTFR1Q15390 333 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 MICAL1Q8TDZ2 1067 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 UNC5CO95185 931 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 GAS8O95995 478 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 RNF43Q68DV7 783 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 FBF1Q8TES7 1133 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 GMCL1Q96IK5 515 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 ZNF577Q9BSK1 485 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 PI4KBQ9UBF8 816 aa25.2■■□□□ 1.62
TSKU-201ENST00000333090 PIK3CDO00329 1044 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 CCNB1P14635 433 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 ADRA2BP18089 450 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 HOXA10P31260 410 aaPredicted RBP25.19■■□□□ 1.62
TSKU-201ENST00000333090 STRN3Q13033 797 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 MYBPC2Q14324 1141 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 HHIPL2Q6UWX4 724 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 HSPBP1Q9NZL4 362 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 ANAPC7Q9UJX3 599 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 DDX39AO00148 427 aaKnown RBP25.19■■□□□ 1.62
TSKU-201ENST00000333090 CDH16O75309 829 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 CYP11B1P15538 503 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 PTK6Q13882 451 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 TMEM179Q6ZVK1 233 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 XXYLT1Q8NBI6 393 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 C9orf72Q96LT7 481 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 HERPUD2Q9BSE4 406 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 TRAIPQ9BWF2 469 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 PRR12Q9ULL5 1215 aa25.19■■□□□ 1.62
TSKU-201ENST00000333090 GOLGA8IPA6NC78 632 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 GOLGA8JA6NMD2 632 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 TAC1P20366 129 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 FOXN2P32314 431 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 CRKP46108 304 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 TBC1D10BQ4KMP7 808 aaPredicted RBP25.18■■□□□ 1.62
TSKU-201ENST00000333090 PADI6Q6TGC4 694 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 GMCL1P1Q8NEA9 526 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 ELMO3Q96BJ8 720 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 ARHGEF10LQ9HCE6 1279 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 LARSQ9P2J5 1176 aaKnown RBP25.18■■□□□ 1.62
TSKU-201ENST00000333090 G3V3G9 751 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 ARP10275 920 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 ABCB5Q2M3G0 1257 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 DCAF8Q5TAQ9 597 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 CNKSR1Q969H4 720 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 FAM118BQ9BPY3 351 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 TMEM206Q9H813 350 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 ADGRA3Q8IWK6 1321 aa25.18■■□□□ 1.62
TSKU-201ENST00000333090 MAPK4P31152 587 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 GCKP35557 465 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 GSTTP1A0A1W2PQM5 241 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 RASA4BC9J798 803 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 CLGNO14967 610 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 RASA4O43374 803 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 MFAP3P55082 362 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 TMED2Q15363 201 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 CEP55Q53EZ4 464 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 NAIF1Q69YI7 327 aaPredicted RBP25.17■■□□□ 1.62
TSKU-201ENST00000333090 PPP1R21Q6ZMI0 780 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 PHLDB2Q86SQ0 1253 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 PRUNE1Q86TP1 453 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 VSIG1Q86XK7 387 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 SHC3Q92529 594 aa25.17■■□□□ 1.62
TSKU-201ENST00000333090 UTP4Q969X6 686 aaKnown RBP25.17■■□□□ 1.62
TSKU-201ENST00000333090 R3HDM2Q9Y2K5 976 aaKnown RBP25.17■■□□□ 1.62
TSKU-201ENST00000333090 TCEA3O75764 348 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 SKIV2L2P42285 1042 aaKnown RBP25.16■■□□□ 1.62
TSKU-201ENST00000333090 RBM5P52756 815 aaKnown RBP eCLIP25.16■■□□□ 1.62
TSKU-201ENST00000333090 IL9RQ01113 521 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 GRK7Q8WTQ7 553 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 SEMA4DQ92854 862 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 ERP27Q96DN0 273 aa25.16■■□□□ 1.62
TSKU-201ENST00000333090 RAB3IPQ96QF0 476 aaPredicted RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms