RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 RPGRIP1Q96KN7 1286 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 NFKBIZQ9BYH8 718 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 INO80BQ9C086 356 aaPredicted RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 TUT1Q9H6E5 874 aaKnown RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 KAT6AQ92794 2004 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 CHRNB2P17787 502 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 PROZP22891 400 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 TNFSF9P41273 254 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 PHKA2P46019 1235 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 GRM1Q13255 1194 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 MEI1Q5TIA1 1274 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 ATF7IP2Q5U623 682 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 MPZL3Q6UWV2 235 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
TPM3-205ENST00000328159 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
TPM3-205ENST00000328159 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 EPS8L1Q8TE68 723 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 COG1Q8WTW3 980 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 PTPRHQ9HD43 1115 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 ARGLU1Q9NWB6 273 aaPredicted RBP16.09■□□□□ 0.17
TPM3-205ENST00000328159 TAS2R14Q9NYV8 317 aa16.09■□□□□ 0.17
TPM3-205ENST00000328159 PDE2AO00408 941 aaPredicted RBP16.08■□□□□ 0.17
TPM3-205ENST00000328159 B4GALT5O43286 388 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 ADCY6O43306 1168 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 SLC10A3P09131 477 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 AP3M2P53677 418 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 DGKDQ16760 1214 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 IFNL1Q8IU54 200 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 OR5B17Q8NGF7 314 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 CTNNBL1Q8WYA6 563 aaPredicted RBP16.08■□□□□ 0.17
TPM3-205ENST00000328159 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.17
TPM3-205ENST00000328159 PARD6BQ9BYG5 372 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 MINDY3Q9H8M7 445 aa16.08■□□□□ 0.17
TPM3-205ENST00000328159 ANKRD62A6NC57 917 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
TPM3-205ENST00000328159 CLCN6P51797 869 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PPFIA1Q13136 1202 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 IRF5Q13568 498 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 TMEM132AQ24JP5 1023 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
TPM3-205ENST00000328159 WDR49Q8IV35 697 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 LRRC57Q8N9N7 239 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 LMBR1Q8WVP7 490 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 RFFLQ8WZ73 363 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PSMB7Q99436 277 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PDCL3Q9H2J4 239 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 ANKZF1Q9H8Y5 726 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.16
TPM3-205ENST00000328159 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 CPSF3Q9UKF6 684 aaKnown RBP16.08■□□□□ 0.16
TPM3-205ENST00000328159 AKT3Q9Y243 479 aa16.08■□□□□ 0.16
TPM3-205ENST00000328159 A0A087WZ62 844 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 HOXC6P09630 235 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 KRT5P13647 590 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 CYP11B1P15538 503 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 ABCB4P21439 1286 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 TMOD1P28289 359 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 CXCR5P32302 372 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 PDE6CP51160 858 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 SURF1Q15526 300 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 GRIK4Q16099 956 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 FAM187BQ17R55 369 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 ZNF568Q3ZCX4 644 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 EEF1DP3Q658K8 133 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
TPM3-205ENST00000328159 USP6NLQ92738 828 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 FDXACB1Q9BRP7 624 aaPredicted RBP16.07■□□□□ 0.16
TPM3-205ENST00000328159 ISCUQ9H1K1 167 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
TPM3-205ENST00000328159 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
TPM3-205ENST00000328159 PHACTR2O75167 634 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 RTN2O75298 545 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 RHOXF2BP0C7M4 288 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 INHBEP58166 350 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 FMO1Q01740 532 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 CDR2Q01850 454 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 SLC35G2Q8TBE7 412 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 ARHGEF26Q96DR7 871 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 ARID3AQ99856 593 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 RHOXF2Q9BQY4 288 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 THAP2Q9H0W7 228 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 ANK1P16157 1881 aa16.06■□□□□ 0.16
TPM3-205ENST00000328159 A6NJR5 290 aa16.05■□□□□ 0.16
TPM3-205ENST00000328159 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms