RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CNGA4Q8IV77 575 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ARMC5Q96C12 935 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 ZNF333Q96JL9 665 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 DEFB118Q96PH6 123 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 NCAPGQ9BPX3 1015 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 TMX1Q9H3N1 280 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 STARD7Q9NQZ5 370 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 TRPV2Q9Y5S1 764 aa13.81□□□□□ -0.2
DDX39A-202ENST00000324340 TTC26A0AVF1 554 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 LRRIQ3A6PVS8 624 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 RNF225M0QZC1 329 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CLGNO14967 610 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 NOL4O94818 638 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 TRIM21P19474 475 aaKnown RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 FECHP22830 423 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 PON1P27169 355 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CDK7P50613 346 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 MYL7Q01449 175 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 KYAT1Q16773 422 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 FAM26DQ5JW98 314 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 C15orf39Q6ZRI6 1047 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CATSPER4Q7RTX7 472 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 SRLQ86TD4 932 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CCDC127Q96BQ5 260 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 MYCBPQ99417 103 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 SENP6Q9GZR1 1112 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 RBAKQ9NYW8 714 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-202ENST00000324340 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
DDX39A-202ENST00000324340 HTTP42858 3142 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 ANK1P16157 1881 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 ARVCFO00192 962 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 EPHB6O15197 1021 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TADA3O75528 432 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 CHRNA1P02708 482 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 FGFR4P22455 802 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TNFSF9P41273 254 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 MAGEA9P43362 315 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 CTCFP49711 727 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 GTF2A1P52655 376 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 LBX1P52954 281 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 WNT7BP56706 349 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 SURF1Q15526 300 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 DCAF4L1Q3SXM0 396 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 KRT39Q6A163 491 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 NOTUMQ6P988 496 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 APBB1IPQ7Z5R6 666 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM139Q8IV31 216 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 LMO3Q8TAP4 145 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 CPLX3Q8WVH0 158 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 PPP1R13BQ96KQ4 1090 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 PCMTD1Q96MG8 357 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 CRACR2AQ9BSW2 395 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 GANQ9H2C0 597 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 TRMT13Q9NUP7 481 aaKnown RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 GCNT4Q9P109 453 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
DDX39A-202ENST00000324340 DAAM1Q9Y4D1 1078 aa13.79□□□□□ -0.2
DDX39A-202ENST00000324340 USP27XA6NNY8 438 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 B4GALT4O60513 344 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 TUBBP07437 444 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 HARSP12081 509 aaKnown RBP13.78□□□□□ -0.2
DDX39A-202ENST00000324340 SLC9A1P19634 815 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 ACTN2P35609 894 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 GCLMP48507 274 aa13.78□□□□□ -0.2
DDX39A-202ENST00000324340 MXI1P50539 228 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms