RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CCDC66A2RUB6 948 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 NT5C1B-RDH14C9J2C7 533 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 IKBKBO14920 756 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ACRP10323 421 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 CKBP12277 381 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 RAD51Q06609 339 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ANGPTL8Q6UXH0 198 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 NUP85Q9BW27 656 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ACADMP11310 421 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 FYB2Q5VWT5 728 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 ZC3H18Q86VM9 953 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 CFAP61Q8NHU2 1237 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 SLITRK1Q96PX8 696 aa9.58□□□□□ -0.88
CTC1-201ENST00000315684 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 AGO4Q9HCK5 861 aaKnown RBP9.58□□□□□ -0.88
CTC1-201ENST00000315684 TOMM70O94826 608 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 INHBAP08476 426 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 LBX1P52954 281 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 ATXN3P54252 364 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 SNX17Q15036 470 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 KYAT1Q16773 422 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 BBS9Q3SYG4 887 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 ZNF484Q5JVG2 852 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 RIN2Q8WYP3 895 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 ATXN3LQ9H3M9 355 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 TPI1P60174 286 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 KRT71Q3SY84 523 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 TADA2BQ86TJ2 420 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 RUSC1Q9BVN2 902 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 GINM1Q9NU53 330 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 SLC25A13Q9UJS0 675 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 PCDHA13Q9Y5I0 950 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 MAP3K7CLP57077 242 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 EVX2Q03828 476 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 SLMAPQ14BN4 828 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 CATSPERGQ6ZRH7 1159 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 FBXL13Q8NEE6 735 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 ATXN7L3BQ96GX2 97 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 MTMR12Q9C0I1 747 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 CFAP69A5D8W1 941 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 E5RI56 91 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 USP2O75604 605 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 SKIP12755 728 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 EPHB3P54753 998 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 EXOSC10Q01780 885 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 C2orf54Q08AI8 447 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 CDH18Q13634 790 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 ANKS4BQ8N8V4 417 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 MRPS31Q92665 395 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 POP1Q99575 1024 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 EDEM3Q9BZQ6 932 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 IL25Q9H293 177 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 CHORDC1Q9UHD1 332 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 DBR1Q9UK59 544 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 VWDEQ8N2E2 1590 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 TSPAN3O60637 253 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 AVPR1AP37288 418 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 TAF6P49848 677 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 CSE1LP55060 971 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 ATP2C1P98194 919 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 SATB1Q01826 763 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 LAMTOR4Q0VGL1 99 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 ZNF211Q13398 564 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 PLPP4Q5VZY2 271 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 GMCL1P1Q8NEA9 526 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 LPPQ93052 612 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 A1CFQ9NQ94 594 aaKnown RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.57□□□□□ -0.881e-9■□□□□ 8.8
CTC1-201ENST00000315684 RSPH14Q9UHP6 348 aa9.57□□□□□ -0.88
CTC1-201ENST00000315684 MED1Q15648 1581 aaPredicted RBP9.57□□□□□ -0.88
CTC1-201ENST00000315684 MYMKA6NI61 221 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 H7C4K7 107 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 CASP4P49662 377 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 PRKCZQ05513 592 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 CHSY1Q86X52 802 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 SLC28A3Q9HAS3 691 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 PDGFCQ9NRA1 345 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 NVLO15381 856 aaKnown RBP9.56□□□□□ -0.88
CTC1-201ENST00000315684 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
CTC1-201ENST00000315684 PPM1LQ5SGD2 360 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 ADCK2Q7Z695 626 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 RAB44Q7Z6P3 723 aaPredicted RBP9.56□□□□□ -0.88
CTC1-201ENST00000315684 ACOT1Q86TX2 421 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 ARNTL2Q8WYA1 636 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 FTLP02792 175 aaPredicted RBP9.56□□□□□ -0.88
CTC1-201ENST00000315684 ACAT1P24752 427 aaKnown RBP9.56□□□□□ -0.88
CTC1-201ENST00000315684 U2AF2P26368 475 aaKnown RBP eCLIP9.56□□□□□ -0.888e-8■■■■■ 28.7
CTC1-201ENST00000315684 TMEM132BQ14DG7 1078 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 SPOPLQ6IQ16 392 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 METTL7BQ6UX53 244 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 MAFGO15525 162 aa9.56□□□□□ -0.88
CTC1-201ENST00000315684 ATP9BO43861 1147 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms