RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 F8VZ95 297 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 RRP1BQ14684 758 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 SNX9Q9Y5X1 595 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 EXOC1LA0A1B0GW35 172 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 PDE2AO00408 941 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MCF2LO15068 1137 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KIAA0391O15091 583 aaKnown RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 CALCAP01258 141 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 MMEP08473 750 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ARL1P40616 181 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 C9orf131Q5VYM1 1079 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KCNV1Q6PIU1 500 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 TMC2Q8TDI7 906 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KAT5Q92993 513 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 IGSF9BQ9UPX0 1349 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 IGKV6D-41A0A0C4DH26 115 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 NDC80O14777 642 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 GH1P01241 217 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ITGB3BPQ13352 177 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-201ENST00000314191 LGSNQ5TDP6 509 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 KCND1Q9NSA2 647 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 PARVAQ9NVD7 372 aa6.59□□□□□ -1.35
PRKDC-201ENST00000314191 ARL4AP40617 200 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 ATF7IP2Q5U623 682 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 TRAPPC12Q8WVT3 735 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 CFAP57Q96MR6 1250 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 DBR1Q9UK59 544 aaKnown RBP6.59□□□□□ -1.36
PRKDC-201ENST00000314191 HMGB1P1B2RPK0 211 aaPredicted RBP6.59□□□□□ -1.36
PRKDC-201ENST00000314191 TWF2Q6IBS0 349 aaKnown RBP6.59□□□□□ -1.36
PRKDC-201ENST00000314191 UBA3Q8TBC4 463 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 TLR10Q9BXR5 811 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 ACP6Q9NPH0 428 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 GTF3C4Q9UKN8 822 aa6.59□□□□□ -1.36
PRKDC-201ENST00000314191 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ADORA2BP29275 332 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NOP14P78316 857 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 JAMLQ86YT9 394 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC110Q8TBZ0 833 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 HSD17B14Q9BPX1 270 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 TJP3O95049 919 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 PRLRP16471 622 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 RGS7P49802 495 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 FAM102AQ5T9C2 384 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 HVCN1Q96D96 273 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 KLHL14Q9P2G3 628 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ANXA13P27216 316 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NLRP11P59045 1033 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 TFDP2Q14188 446 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC14Q49A88 953 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NUGGCQ68CJ6 796 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 LRRC8CQ8TDW0 803 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SREK1Q8WXA9 508 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 KIF12Q96FN5 646 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 IP6K2Q9UHH9 426 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 DDX3XO00571 662 aaKnown RBP eCLIP6.58□□□□□ -1.369e-17■■■■■ 34.1
PRKDC-201ENST00000314191 INHBAP08476 426 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MSH2P43246 934 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 WDR93Q6P2C0 686 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CASKIN2Q8WXE0 1202 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 BAP1Q92560 729 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CYFIP2Q96F07 1278 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ZIM3Q96PE6 472 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 GCOM2Q9BZD3 368 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 LRRC14Q15048 493 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ATP6V1G3Q96LB4 118 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 A1CFQ9NQ94 594 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 F5H423 210 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 KRT3P12035 628 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 FGFR4P22455 802 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ADCY2Q08462 1091 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CFAP157Q5JU67 520 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 C6orf118Q5T5N4 469 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 IZUMO3Q5VZ72 239 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ARHGEF18Q6ZSZ5 1173 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 FBXO16Q8IX29 292 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SMC6Q96SB8 1091 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 KCTD10Q9H3F6 313 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ADARB2Q9NS39 739 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 HEY1Q9Y5J3 304 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SASH3O75995 380 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 TROVE2P10155 538 aaKnown RBP eCLIP6.58□□□□□ -1.365e-10■□□□□ 9.2
PRKDC-201ENST00000314191 MYBL1P10243 752 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ARPP19P56211 112 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CDR2Q01850 454 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MXD4Q14582 209 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 VSIG10LQ86VR7 867 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 PDIK1LQ8N165 341 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SIX6OS1Q8N1H7 587 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 GDAP1Q8TB36 358 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SCFD2Q8WU76 684 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MLXIPLQ9NP71 852 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ASTN2O75129 1339 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 PEX10O60683 326 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NCOA4Q13772 614 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MEI1Q5TIA1 1274 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms