RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 NOC3LQ8WTT2 800 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 SAMD11Q96NU1 681 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 APOL5Q9BWW9 433 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 PPEF2O14830 753 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 NR1I2O75469 434 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 GLP2RO95838 553 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 LTBRP36941 435 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 ENOX2Q16206 610 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 MRPL9Q9BYD2 267 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
SCFD1-201ENST00000311943 A0A0B4J269 797 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 FAM237AA0A1B0GTK4 181 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 INPPL1O15357 1258 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 ALDH2P05091 517 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 MCF2P10911 925 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
SCFD1-201ENST00000311943 BRCC3P46736 316 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 PNOCQ13519 176 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCFD1-201ENST00000311943 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
SCFD1-201ENST00000311943 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 SNX27Q96L92 541 aa13.16□□□□□ -0.3
SCFD1-201ENST00000311943 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CLIC2O15247 247 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 TBX10O75333 385 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 PIGRP01833 764 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 KCNA5P22460 613 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CCDC65Q8IXS2 484 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 NSUN3Q9H649 340 aaKnown RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CLDND1Q9NY35 253 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 A0A1W2PQ27 194 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 A0A1W2PQ64 194 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 A0A1W2PQD8 194 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 FSCN2O14926 492 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 THP07101 528 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 GRIK3Q13003 919 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 L1TD1Q5T7N2 865 aaKnown RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 LMBRD2Q68DH5 695 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CCDC94Q9BW85 323 aaPredicted RBP13.15□□□□□ -0.3
SCFD1-201ENST00000311943 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
SCFD1-201ENST00000311943 CXCL14O95715 111 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 NFICP08651 508 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 SPATA31D3P0C874 917 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 GAP43P17677 238 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 SPATA31D4Q6ZUB0 917 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 ELMO3Q96BJ8 720 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 ZBP1Q9H171 429 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
SCFD1-201ENST00000311943 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
SCFD1-201ENST00000311943 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
SCFD1-201ENST00000311943 C2orf71A6NGG8 1288 aa13.13□□□□□ -0.31
SCFD1-201ENST00000311943 ADAM12O43184 909 aa13.13□□□□□ -0.31
SCFD1-201ENST00000311943 EFEMP2O95967 443 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms