RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PPATQ06203 517 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 DNAJC3Q13217 504 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 RAB3IPQ96QF0 476 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 PARP2Q9UGN5 583 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 CLDN3O15551 220 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 IL9RQ01113 521 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 EPHA7Q15375 998 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 FRMD5Q7Z6J6 570 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 XXYLT1Q8NBI6 393 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 TAS1R2Q8TE23 839 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 METTL5Q9NRN9 209 aaKnown RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 ANAPC7Q9UJX3 599 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 VAV3Q9UKW4 847 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 MDH1BQ5I0G3 518 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 ZBTB45Q96K62 511 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 TMEM237Q96Q45 408 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 PRM3Q9NNZ6 103 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 ALG6Q9Y672 507 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 F5H423 210 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 F8VZ95 297 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 ELF3P78545 371 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 CCDC62Q6P9F0 684 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 THNSL1Q8IYQ7 743 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 ERP44Q9BS26 406 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 CFAP69A5D8W1 941 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 MAP3K6O95382 1288 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 COMTP21964 271 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 CAP2P40123 477 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 TCRBV7S2A1N4TA0A589 114 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 CPP00450 1065 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 PRLRP16471 622 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 HSPA9P38646 679 aaKnown RBP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 EDRF1Q3B7T1 1238 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 PPP1R21Q6ZMI0 780 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 CTNNAL1Q9UBT7 734 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
RETREG3-201ENST00000309428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
RETREG3-201ENST00000309428 COL16A1Q07092 1604 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-201ENST00000309428 RNASELQ05823 741 aaKnown RBP13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 C1orf186Q6ZWK4 172 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TMEM130Q8N3G9 435 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 RUNDC3BQ96NL0 473 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ACCSQ96QU6 501 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ZCWPW1Q9H0M4 648 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SYNCQ9H7C4 482 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 C10orf88Q9H8K7 445 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 DLGAP2Q9P1A6 1054 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 HAO1Q9UJM8 370 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TMX2Q9Y320 296 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 GAP43P17677 238 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 CPA2P48052 419 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SNRNP35Q16560 246 aaKnown RBP13.48□□□□□ -0.25
RETREG3-201ENST00000309428 FIGNQ5HY92 759 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ARHGEF18Q6ZSZ5 1173 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TRIM50Q86XT4 487 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 DEFB129Q9H1M3 183 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SLITRK6Q9H5Y7 841 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 AP1G2O75843 785 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 MAPK4P31152 587 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SATB1Q01826 763 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 DRP2Q13474 957 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TKFCQ3LXA3 575 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms