RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 CA8P35219 290 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SLC11A1P49279 550 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 AFF1P51825 1210 aaKnown RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TUSC3Q13454 348 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 EPM2AIP1Q7L775 607 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ZNF280BQ86YH2 543 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 COLGALT2Q8IYK4 626 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KIAA0895Q8NCT3 520 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ZNF507Q8TCN5 953 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 POF1BQ8WVV4 589 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PPP2R3CQ969Q6 453 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MRPL38Q96DV4 380 aaKnown RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ENTPD7Q9NQZ7 604 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MIOSQ9NXC5 875 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LMCD1Q9NZU5 365 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CNTN3Q9P232 1028 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 STK39Q9UEW8 545 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PLAGL2Q9UPG8 496 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 STXBP5LQ9Y2K9 1186 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PTGESO14684 152 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NRP1O14786 923 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GRM6O15303 877 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LPXNO60711 386 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TNFSF9P41273 254 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ACOT2P49753 483 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 DSC1Q08554 894 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 STK4Q13043 487 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ADGRE1Q14246 886 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KNOP1Q1ED39 458 aaKnown RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CD302Q8IX05 232 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ELOA2Q8IYF1 753 aaPredicted RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 UROC1Q96N76 676 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GSDMAQ96QA5 445 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 COLEC11Q9BWP8 271 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GTPBP4Q9BZE4 634 aaKnown RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TLR9Q9NR96 1032 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CGNQ9P2M7 1197 aaKnown RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CPSF3Q9UKF6 684 aaKnown RBP11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 LZTS1Q9Y250 596 aa11.97□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PRRC2BQ5JSZ5 2229 aaKnown RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SMIM28A0A1B0GU29 152 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 EXTL3O43909 919 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 IL18RAPO95256 599 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KCNE1P15382 129 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 ZBTB41Q5SVQ8 909 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MAFAQ8NHW3 353 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MICAL1Q8TDZ2 1067 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 IGSF21Q96ID5 467 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 PPP1R10Q96QC0 940 aaKnown RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 TSPAN18Q96SJ8 248 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 CBWD1Q9BRT8 395 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 FAM213AQ9BRX8 229 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 NSUN3Q9H649 340 aaKnown RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 RBAKQ9NYW8 714 aaPredicted RBP11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 MTCH2Q9Y6C9 303 aa11.96□□□□□ -0.49
CSPG4P2Y-201ENST00000306853 VWA8A3KMH1 1905 aa11.96□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TTC26A0AVF1 554 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CLIC2O15247 247 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 FAM189A1O60320 539 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 B4GALT3O60512 393 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TADA2AO75478 443 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ADSSP30520 456 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 CYP2J2P51589 502 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 POU5F1Q01860 360 aaKnown RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 STIM1Q13586 685 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ENOX2Q16206 610 aaKnown RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 SLC10A6Q3KNW5 377 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P2Y-201ENST00000306853 PLPP4Q5VZY2 271 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms