RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 PCIF1Q9H4Z3 704 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 CTNNA1P35221 906 aaKnown RBP21.59■■□□□ 1.05
HPS6-201ENST00000299238 KIF22Q14807 665 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 MTHFD1LQ6UB35 978 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 ABCF3Q9NUQ8 709 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 CHORDC1Q9UHD1 332 aaPredicted RBP21.59■■□□□ 1.05
HPS6-201ENST00000299238 AMFRQ9UKV5 643 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 TTC7AQ9ULT0 858 aaPredicted RBP21.59■■□□□ 1.05
HPS6-201ENST00000299238 C2CD2Q9Y426 696 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 DAAM1Q9Y4D1 1078 aa21.59■■□□□ 1.05
HPS6-201ENST00000299238 FGGP02679 453 aa21.58■■□□□ 1.05
HPS6-201ENST00000299238 MKRN4PQ13434 485 aaPredicted RBP21.58■■□□□ 1.05
HPS6-201ENST00000299238 DCAF12L1Q5VU92 463 aa21.58■■□□□ 1.05
HPS6-201ENST00000299238 ARHGAP22Q7Z5H3 698 aa21.58■■□□□ 1.05
HPS6-201ENST00000299238 CHMP6Q96FZ7 201 aa21.58■■□□□ 1.05
HPS6-201ENST00000299238 SLITRK6Q9H5Y7 841 aa21.58■■□□□ 1.05
HPS6-201ENST00000299238 DBR1Q9UK59 544 aaKnown RBP21.58■■□□□ 1.05
HPS6-201ENST00000299238 DDX3YO15523 660 aaKnown RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 ECEL1O95672 775 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 PAEPP09466 180 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 NQO1P15559 274 aaKnown RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 VCAM1P19320 739 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 RARRES1P49788 294 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 RPS6P62753 249 aaKnown RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 DLG4P78352 724 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 MXRA7P84157 204 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 SPP2Q13103 211 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 ZNF211Q13398 564 aaPredicted RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 MTMR2Q13614 643 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 NUGGCQ68CJ6 796 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 CTNNBL1Q8WYA6 563 aaPredicted RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 NAF1Q96HR8 494 aaKnown RBP21.58■■□□□ 1.04
HPS6-201ENST00000299238 TAAR1Q96RJ0 339 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 STK38LQ9Y2H1 464 aa21.58■■□□□ 1.04
HPS6-201ENST00000299238 DOCK1Q14185 1865 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 BRCA1P38398 1863 aaKnown RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 FOXN3O00409 490 aaPredicted RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 ZNF280AP59817 542 aaPredicted RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 ARMC9Q7Z3E5 817 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 SEC14L1Q92503 715 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 GORASP1Q9BQQ3 440 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 TRIM51Q9BSJ1 452 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 MTFR1LQ9H019 292 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 THAP2Q9H0W7 228 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 LARSQ9P2J5 1176 aaKnown RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 PDHA1P08559 390 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 CCND1P24385 295 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 QARSP47897 775 aaKnown RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 POU5F1Q01860 360 aaKnown RBP21.57■■□□□ 1.04
HPS6-201ENST00000299238 PGM5Q15124 567 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 ANO7Q6IWH7 933 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 SLC16A10Q8TF71 515 aa21.57■■□□□ 1.04
HPS6-201ENST00000299238 IGF2BP3O00425 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
HPS6-201ENST00000299238 CTNND1O60716 968 aaKnown RBP21.56■■□□□ 1.04
HPS6-201ENST00000299238 PPFIA2O75334 1257 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 RFX1P22670 979 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 ZSWIM2Q8NEG5 633 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 FAM81AQ8TBF8 368 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 TMEM174Q8WUU8 243 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 UBLCP1Q8WVY7 318 aaPredicted RBP21.56■■□□□ 1.04
HPS6-201ENST00000299238 SYT15Q9BQS2 421 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 COG5Q9UP83 839 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 ASTN2O75129 1339 aaPredicted RBP21.56■■□□□ 1.04
HPS6-201ENST00000299238 KRT16P08779 473 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 TNFAIP3P21580 790 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 BAG6P46379 1132 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 SCNN1BP51168 640 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 AADACL2Q6P093 401 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 SLC20A1Q8WUM9 679 aa21.56■■□□□ 1.04
HPS6-201ENST00000299238 GSTA1P08263 222 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 ATP2A2P16615 1042 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 PPP3CAQ08209 521 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 UGCGQ16739 394 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 LRIG3Q6UXM1 1119 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 EMSYQ7Z589 1322 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 RPAP3Q9H6T3 665 aaPredicted RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 TBC1D22BQ9NU19 505 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 MAP3K20Q9NYL2 800 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 TMEM150BA6NC51 233 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 ANKRD62A6NC57 917 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 LYPLA2O95372 231 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 MAPTP10636 758 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 MYCLP12524 364 aaPredicted RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 NCALDP61601 193 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 ALCAMQ13740 583 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 DALRD3Q5D0E6 543 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 C1orf220Q5T0J3 134 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 INTS8Q75QN2 995 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 RBM41Q96IZ5 413 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 XPO6Q96QU8 1125 aaKnown RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 GINM1Q9NU53 330 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 TMOD4Q9NZQ9 345 aa21.55■■□□□ 1.04
HPS6-201ENST00000299238 CTDP1Q9Y5B0 961 aaPredicted RBP21.55■■□□□ 1.04
HPS6-201ENST00000299238 CFAP73A6NFT4 308 aa21.54■■□□□ 1.04
HPS6-201ENST00000299238 UBOX5O94941 541 aa21.54■■□□□ 1.04
HPS6-201ENST00000299238 LUC7L3O95232 432 aaKnown RBP21.54■■□□□ 1.04
HPS6-201ENST00000299238 KRT13P13646 458 aa21.54■■□□□ 1.04
HPS6-201ENST00000299238 PLS3P13797 630 aa21.54■■□□□ 1.04
HPS6-201ENST00000299238 YWHABP31946 246 aaKnown RBP21.54■■□□□ 1.04
HPS6-201ENST00000299238 ZNF746Q6NUN9 644 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms