RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PKD2L2Q9NZM6 624 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 AURKCQ9UQB9 309 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SOX11P35716 441 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PHKA2P46019 1235 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SFR1Q86XK3 245 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ZFRQ96KR1 1074 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 TRIM8Q9BZR9 551 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 NEDD4P46934 1319 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MYO1GB0I1T2 1018 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 TBC1D4O60343 1298 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PLEKHA8P1O95397 391 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 USP17L8P0C7I0 530 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 KCNA3P22001 575 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 IL10P22301 178 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 COASYQ13057 564 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ATAD3BQ5T9A4 648 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 RNF25Q96BH1 459 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 CCDC17Q96LX7 622 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 KANSL2Q9H9L4 492 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 M0QYV0 167 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PER1O15534 1290 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PDE8BO95263 885 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 GSNP06396 782 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 KCNA2P16389 499 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ADORA2BP29275 332 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SYTL3Q4VX76 610 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SH3KBP1Q96B97 665 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ALG13Q9NP73 1137 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 RSL24D1Q9UHA3 163 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 USP27XA6NNY8 438 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 GOLGA8RI6L899 631 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 CLDN3O15551 220 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 LARGE1O95461 756 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MYBL1P10243 752 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MIGA2Q7L4E1 593 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 CROCCP3Q8IVE0 287 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SCN4BQ8IWT1 228 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PROM2Q8N271 834 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 GALNT4Q8N4A0 578 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 C11orf70Q9BRQ4 267 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 DDX47Q9H0S4 455 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 POLR3FQ9H1D9 316 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 CAB39Q9Y376 341 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 LOC102724159A0A0B4J2E5 919 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 DENND3A2RUS2 1198 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 CBFA2T3O75081 653 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PWP2Q15269 919 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ANKRD40Q6AI12 368 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 POP5Q969H6 163 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MPP4Q96JB8 637 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF556Q9HAH1 456 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 SEC31BQ9NQW1 1179 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 USP17L5A8MUK1 530 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 TCP11X1B4DZS4 312 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ATXN3P54252 364 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF746Q6NUN9 644 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 KCNN4O15554 427 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MYCP01106 439 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 UBTFL6P0CB48 400 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MTMR1Q13613 665 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 DHX34Q14147 1143 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 KIZQ2M2Z5 673 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 INTS2Q9H0H0 1204 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 RCOR1Q9UKL0 485 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 MEFVO15553 781 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 S100A1P23297 94 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 ARL6IP4Q66PJ3 421 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 LRIG3Q6UXM1 1119 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 THNSL1Q8IYQ7 743 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 PHF21AQ96BD5 680 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 COQ7Q99807 217 aa5.86□□□□□ -1.47
CPSF2-201ENST00000298875 LIMA1Q9UHB6 759 aaKnown RBP5.86□□□□□ -1.47
CPSF2-201ENST00000298875 C5orf58C9J3I9 102 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 RUNX1T1Q06455 604 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 TRIM16LQ309B1 348 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 SPDYAQ5MJ70 313 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 THEMIS2Q5TEJ8 643 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 IZUMO3Q5VZ72 239 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 IKBIPQ70UQ0 350 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 MAD2L2Q9UI95 211 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 SLC16A4O15374 487 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 SRP72O76094 671 aaKnown RBP5.85□□□□□ -1.47
CPSF2-201ENST00000298875 SERPIND1P05546 499 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 CDK8P49336 464 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 TNFAIP2Q03169 654 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 WDR48Q8TAF3 677 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 WNT8AQ9H1J5 351 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 HSPBP1Q9NZL4 362 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 MOCS2O96007 188 aaPredicted RBP5.85□□□□□ -1.47
CPSF2-201ENST00000298875 PROSER3Q2NL68 480 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 USPL1Q5W0Q7 1092 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 ANKS3Q6ZW76 656 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 CATSPER4Q7RTX7 472 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 ZNF341Q9BYN7 854 aa5.85□□□□□ -1.47
CPSF2-201ENST00000298875 ATXN2Q99700 1313 aaKnown RBP5.85□□□□□ -1.47
CPSF2-201ENST00000298875 DDX5P17844 614 aaKnown RBP5.85□□□□□ -1.47
CPSF2-201ENST00000298875 CDKL3Q8IVW4 592 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms