RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CLSTN2Q9H4D0 955 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 PARVGQ9HBI0 331 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 TBC1D7Q9P0N9 293 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 GMPR2Q9P2T1 348 aaKnown RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 PADI3Q9ULW8 664 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 ST3GAL5Q9UNP4 418 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 GINS2Q9Y248 185 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 TSC2P49815 1807 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CCDC169A6NNP5 214 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 TISP43B9A030 160 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 MEFVO15553 781 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 TBCAO75347 108 aaKnown RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 FAM13AO94988 1023 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 RPN1P04843 607 aaKnown RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 RPLP2P05387 115 aaKnown RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 IDEP14735 1019 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ATF7P17544 494 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 RFC2P35250 354 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 PHKA2P46019 1235 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 GTF2BQ00403 316 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 MLLT1Q03111 559 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 FPGSQ05932 587 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 STK4Q13043 487 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 DMP1Q13316 513 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 POSTNQ15063 836 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 TEAD4Q15561 434 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CAMK4Q16566 473 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 FAM187BQ17R55 369 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ODR4Q5SWX8 454 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 UBXN11Q5T124 520 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 RASIP1Q5U651 963 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 EEF1DP3Q658K8 133 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ZNF365Q70YC5 407 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ZNF720Q7Z2F6 126 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CDR2LQ86X02 465 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 SLC9A9Q8IVB4 645 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ELOA2Q8IYF1 753 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 MYCT1Q8N699 235 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ZSWIM2Q8NEG5 633 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 DBF4BQ8NFT6 615 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 RHBDD1Q8TEB9 315 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 ZDHHC1Q8WTX9 485 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CPB2Q96IY4 423 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.374e-6■■□□□ 12.7
SSX3-201ENST00000298396 PYM1Q9BRP8 204 aaKnown RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 IFIH1Q9BYX4 1025 aaKnown RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 HAPLN2Q9GZV7 340 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 TSPAN10Q9H1Z9 355 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 ST6GALNAC4Q9H4F1 302 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 C17orf75Q9HAS0 396 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 KMT5AQ9NQR1 393 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 OLFML3Q9NRN5 406 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 RNF19AQ9NV58 838 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 PANK4Q9NVE7 773 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
SSX3-201ENST00000298396 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 GDAQ9Y2T3 454 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 PCDHA5Q9Y5H7 936 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 SQORQ9Y6N5 450 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 BRWD1Q9NSI6 2320 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 PHLPP2Q6ZVD8 1323 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 CNTNAP2Q9UHC6 1331 aa6.49□□□□□ -1.37
SSX3-201ENST00000298396 PVALEFA0A1B0GWK0 134 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 DENND3A2RUS2 1198 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 MEIS3P2A8K0S8 358 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 ANKRD63C9JTQ0 380 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 INO80B-WBP1J3KQ70 363 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 K7ENM7 598 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 M0QZ92 97 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 FAM189A1O60320 539 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 KINO60870 393 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 RPS6KA5O75582 802 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PRPF6O94906 941 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 RHOBTB3O94955 611 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PRKCBP05771 671 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 KRT18P05783 430 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 MYL1P05976 194 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 GAP43P17677 238 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 ARF4P18085 180 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 PROZP22891 400 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PSMA6P60900 246 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 DEFB103AP81534 67 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PAK2Q13177 524 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PPIGQ13427 754 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSX3-201ENST00000298396 TFDP1Q14186 410 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PPP2R5AQ15172 486 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 NFKBIBQ15653 356 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 HERC4Q5GLZ8 1057 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 FAM26FQ5R3K3 315 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 FAM109BQ6ICB4 259 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSX3-201ENST00000298396 RBM43Q6ZSC3 357 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 HAUS6Q7Z4H7 955 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 TMCO2Q7Z6W1 182 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms