RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 KIF3AQ9Y496 699 aa27.76■■■□□ 2.03
U2AF1-201ENST00000291552 CLUHO75153 1309 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 CCDC169A6NNP5 214 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 K7ERI5 159 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 C1RP00736 705 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 AVPR2P30518 371 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 RILPL1Q5EBL4 403 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 HYIQ5T013 277 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 PIK3R5Q8WYR1 880 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 SMG7Q92540 1137 aaKnown RBP27.75■■■□□ 2.03
U2AF1-201ENST00000291552 PHOX2BQ99453 314 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 ACO2Q99798 780 aaKnown RBP27.75■■■□□ 2.03
U2AF1-201ENST00000291552 CLSTN3Q9BQT9 956 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 CDT1Q9H211 546 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 PTPRHQ9HD43 1115 aa27.75■■■□□ 2.03
U2AF1-201ENST00000291552 NOTCH4Q99466 2003 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 ABLIM1O14639 778 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 FAM171A1Q5VUB5 890 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 CD300LGQ6UXG3 332 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 CYP26C1Q6V0L0 522 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 LNX1Q8TBB1 728 aaPredicted RBP27.74■■■□□ 2.03
U2AF1-201ENST00000291552 TTPALQ9BTX7 342 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 NT5C3AQ9H0P0 336 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 PLEKHA4Q9H4M7 779 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 DPP7Q9UHL4 492 aa27.74■■■□□ 2.03
U2AF1-201ENST00000291552 ADAM12O43184 909 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 MRE11P49959 708 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 CREMQ03060 361 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 DMP1Q13316 513 aaPredicted RBP27.73■■■□□ 2.03
U2AF1-201ENST00000291552 MYADMQ96S97 322 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 TMEM134Q9H6X4 195 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 FBXW11Q9UKB1 542 aa27.73■■■□□ 2.03
U2AF1-201ENST00000291552 GRM5P41594 1212 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 SOX4Q06945 474 aaPredicted RBP27.72■■■□□ 2.03
U2AF1-201ENST00000291552 PSMD5Q16401 504 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 ELMSAN1Q6PJG2 1045 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 DRC1Q96MC2 740 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 TARS2Q9BW92 718 aaKnown RBP27.72■■■□□ 2.03
U2AF1-201ENST00000291552 KCNK12Q9HB15 430 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 GOLGA2P5Q9HBQ8 144 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 ZDHHC7Q9NXF8 308 aa27.72■■■□□ 2.03
U2AF1-201ENST00000291552 SFI1A8K8P3 1242 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 TMEM189-UBE2V1I3L0A0 370 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 MEFVO15553 781 aaPredicted RBP27.71■■■□□ 2.03
U2AF1-201ENST00000291552 PROZP22891 400 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 GUCY2CP25092 1073 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 PTPN5P54829 565 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 ZRSR1Q15695 479 aaKnown RBP27.71■■■□□ 2.03
U2AF1-201ENST00000291552 ZNF568Q3ZCX4 644 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 CEP57Q86XR8 500 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 C3orf58Q8NDZ4 430 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 MRPL4Q9BYD3 311 aaKnown RBP27.71■■■□□ 2.03
U2AF1-201ENST00000291552 PRKD2Q9BZL6 878 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 KMT5AQ9NQR1 393 aa27.71■■■□□ 2.03
U2AF1-201ENST00000291552 VWA3AA6NCI4 1184 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 SLC16A4O15374 487 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 ZMYND10O75800 440 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 CLCNKBP51801 687 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 RAD51AP2Q09MP3 1159 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 TMEM119Q4V9L6 283 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 XKR4Q5GH76 650 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 ALKAL1Q6UXT8 129 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 TMEM105Q8N8V8 129 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 LRRC15Q8TF66 581 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 TBC1D32Q96NH3 1257 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 PLIN2Q99541 437 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 PRRX2Q99811 253 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 USP34Q70CQ2 3546 aa27.7■■■□□ 2.02
U2AF1-201ENST00000291552 SMIM28A0A1B0GU29 152 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 H3BQV1 296 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 FGFR3P22607 806 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 GBP2P32456 591 aaPredicted RBP27.69■■■□□ 2.02
U2AF1-201ENST00000291552 OSTNP61366 133 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 TDGQ13569 410 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.69■■■□□ 2.02
U2AF1-201ENST00000291552 RSAD2Q8WXG1 361 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 ZMAT2Q96NC0 199 aaKnown RBP27.69■■■□□ 2.02
U2AF1-201ENST00000291552 EPS15L1Q9UBC2 864 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 DUSP12Q9UNI6 340 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 MYH15Q9Y2K3 1946 aa27.69■■■□□ 2.02
U2AF1-201ENST00000291552 NARSO43776 548 aaKnown RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 SLC12A3P55017 1021 aa27.68■■■□□ 2.02
U2AF1-201ENST00000291552 ELAVL2Q12926 359 aaKnown RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 UPP1Q16831 310 aa27.68■■■□□ 2.02
U2AF1-201ENST00000291552 APBB1IPQ7Z5R6 666 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 SYT2Q8N9I0 419 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 ZBTB45Q96K62 511 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 SNX27Q96L92 541 aa27.68■■■□□ 2.02
U2AF1-201ENST00000291552 TIPINQ9BVW5 301 aa27.68■■■□□ 2.02
U2AF1-201ENST00000291552 C17orf75Q9HAS0 396 aa27.68■■■□□ 2.02
U2AF1-201ENST00000291552 DAXXQ9UER7 740 aaPredicted RBP27.68■■■□□ 2.02
U2AF1-201ENST00000291552 B3GAT3O94766 335 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 MCF2P10911 925 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 ARL6IP4Q66PJ3 421 aaKnown RBP27.67■■■□□ 2.02
U2AF1-201ENST00000291552 CWF19L1Q69YN2 538 aaKnown RBP27.67■■■□□ 2.02
U2AF1-201ENST00000291552 RSPO2Q6UXX9 243 aaPredicted RBP27.67■■■□□ 2.02
U2AF1-201ENST00000291552 TMEM161BQ8NDZ6 487 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 SPIRE2Q8WWL2 714 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 STAMQ92783 540 aa27.67■■■□□ 2.02
U2AF1-201ENST00000291552 NTPCRQ9BSD7 190 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms