RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SMIM28A0A1B0GU29 152 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 F8W810 466 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 TGFB1I1O43294 461 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 CLTAP09496 248 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 CXCL8P10145 99 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 ACOT2P49753 483 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 YARSP54577 528 aaKnown RBP21.68■■□□□ 1.06
TIMP4-201ENST00000287814 PSMD2Q13200 908 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 RABGGTAQ92696 567 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 PAAF1Q9BRP4 392 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 CPSF3Q9UKF6 684 aaKnown RBP21.68■■□□□ 1.06
TIMP4-201ENST00000287814 AGO2Q9UKV8 859 aaKnown RBP21.68■■□□□ 1.06
TIMP4-201ENST00000287814 STXBP5LQ9Y2K9 1186 aa21.68■■□□□ 1.06
TIMP4-201ENST00000287814 NRP1O14786 923 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 CSPG5O95196 566 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 ALDH2P05091 517 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 THP07101 528 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 PLCB3Q01970 1234 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 ENOX2Q16206 610 aaKnown RBP21.67■■□□□ 1.06
TIMP4-201ENST00000287814 BMT2Q1RMZ1 405 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 CRELD2Q6UXH1 353 aaPredicted RBP21.67■■□□□ 1.06
TIMP4-201ENST00000287814 POF1BQ8WVV4 589 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 PPP1R10Q96QC0 940 aaKnown RBP21.67■■□□□ 1.06
TIMP4-201ENST00000287814 TMEM175Q9BSA9 504 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 TOPORSQ9NS56 1045 aaPredicted RBP21.67■■□□□ 1.06
TIMP4-201ENST00000287814 LMBRD1Q9NUN5 540 aa21.67■■□□□ 1.06
TIMP4-201ENST00000287814 PRRC2BQ5JSZ5 2229 aaKnown RBP21.67■■□□□ 1.06
TIMP4-201ENST00000287814 KINO60870 393 aaKnown RBP21.66■■□□□ 1.06
TIMP4-201ENST00000287814 OR1G1P47890 313 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 KCNB1Q14721 858 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 SPATA20Q8TB22 786 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 MRPL38Q96DV4 380 aaKnown RBP21.66■■□□□ 1.06
TIMP4-201ENST00000287814 CCDC34Q96HJ3 373 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 IGSF21Q96ID5 467 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 PCIF1Q9H4Z3 704 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 CNTN3Q9P232 1028 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 FAN1Q9Y2M0 1017 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 PRG3Q9Y2Y8 225 aaPredicted RBP21.66■■□□□ 1.06
TIMP4-201ENST00000287814 PCDHA5Q9Y5H7 936 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 TTC26A0AVF1 554 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 GARTP22102 1010 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 IRS1P35568 1242 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 SPAG1Q07617 926 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 ELOA2Q8IYF1 753 aaPredicted RBP21.66■■□□□ 1.06
TIMP4-201ENST00000287814 TMEM130Q8N3G9 435 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 SAAL1Q96ER3 474 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 MARCH5Q9NX47 278 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 LMCD1Q9NZU5 365 aa21.66■■□□□ 1.06
TIMP4-201ENST00000287814 PRUNE2Q8WUY3 3088 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 UBE4BO95155 1302 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 CASTOR2A6NHX0 329 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 LACTBL1A8MY62 500 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 KCNE1P15382 129 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 IGFBP6P24592 240 aaPredicted RBP21.65■■□□□ 1.06
TIMP4-201ENST00000287814 PPM1AP35813 382 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 SOX4Q06945 474 aaPredicted RBP21.65■■□□□ 1.06
TIMP4-201ENST00000287814 TUSC3Q13454 348 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 KNOP1Q1ED39 458 aaKnown RBP21.65■■□□□ 1.06
TIMP4-201ENST00000287814 VN1R3Q9BXE9 311 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 GOLGA2P5Q9HBQ8 144 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 PCDHGC5Q9Y5F6 944 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 PLXNA4Q9HCM2 1894 aa21.65■■□□□ 1.06
TIMP4-201ENST00000287814 TRIP11Q15643 1979 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 GOLGA8IPA6NC78 632 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 GOLGA8JA6NMD2 632 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 ADRB2P07550 413 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 ERVFC1P60507 584 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 KYAT1Q16773 422 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 ARMCX5Q6P1M9 558 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 MICALL1Q8N3F8 863 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 C18orf25Q96B23 403 aaPredicted RBP21.64■■□□□ 1.05
TIMP4-201ENST00000287814 GBP4Q96PP9 640 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 FAM213AQ9BRX8 229 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 RPF1Q9H9Y2 349 aaKnown RBP21.64■■□□□ 1.05
TIMP4-201ENST00000287814 PLEKHA5Q9HAU0 1116 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 AGPAT3Q9NRZ7 376 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 MAPK8IP1Q9UQF2 711 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 TDRD15B5MCY1 1934 aaKnown RBP21.64■■□□□ 1.05
TIMP4-201ENST00000287814 MYO7AQ13402 2215 aa21.64■■□□□ 1.05
TIMP4-201ENST00000287814 CLIC2O15247 247 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 CCDC85BQ15834 202 aaPredicted RBP21.63■■□□□ 1.05
TIMP4-201ENST00000287814 CCDC47Q96A33 483 aaKnown RBP21.63■■□□□ 1.05
TIMP4-201ENST00000287814 TMEM169Q96HH4 297 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 LMAN2LQ9H0V9 348 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 KCTD10Q9H3F6 313 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 WNT7BP56706 349 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 KRT17Q04695 432 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 UBE3AQ05086 875 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 PTPROQ16827 1216 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 SMYD4Q8IYR2 804 aaPredicted RBP21.63■■□□□ 1.05
TIMP4-201ENST00000287814 PPM1EQ8WY54 764 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 FAM212AQ96EL1 285 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 GSDMAQ96QA5 445 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 LZTS1Q9Y250 596 aa21.63■■□□□ 1.05
TIMP4-201ENST00000287814 ZBTB6Q15916 424 aa21.62■■□□□ 1.05
TIMP4-201ENST00000287814 MAFAQ8NHW3 353 aaPredicted RBP21.62■■□□□ 1.05
TIMP4-201ENST00000287814 SMARCE1Q969G3 411 aa21.62■■□□□ 1.05
TIMP4-201ENST00000287814 HSPBP1Q9NZL4 362 aa21.62■■□□□ 1.05
TIMP4-201ENST00000287814 PUF60Q9UHX1 559 aaKnown RBP21.62■■□□□ 1.05
TIMP4-201ENST00000287814 HOOK1Q9UJC3 728 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms