RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SRGAP3O43295 1099 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 EFCAB14O75071 495 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ZBTB7AO95365 584 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 CFBP00751 764 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 SCG5P05408 212 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 FGFR1P11362 822 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 KCNA2P16389 499 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 NAT1P18440 290 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 SDHBP21912 280 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 XPAP23025 273 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 AKAP5P24588 427 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 SMARCA1P28370 1054 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ELF1P32519 619 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ADCYAP1R1P41586 468 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 MAPKAPK2P49137 400 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 GFRA1P56159 465 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 HTRA3P83110 453 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 CACNB2Q08289 660 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 IFIT5Q13325 482 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 SMC1AQ14683 1233 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 PLCB4Q15147 1175 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 CCNG2Q16589 344 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 UBE2R2Q712K3 238 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 PDZD4Q76G19 769 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 TMC6Q7Z403 805 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 KIF18BQ86Y91 864 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 DCP2Q8IU60 420 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 TCP11L2Q8N4U5 519 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 NETO2Q8NC67 525 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 FAM156AQ8NDB6 213 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 SLC30A5Q8TAD4 765 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ZSCAN18Q8TBC5 510 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 ADAMTS18Q8TE60 1221 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ZFPM2Q8WW38 1151 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 IPCEF1Q8WWN9 437 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 SCLYQ96I15 445 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 TOX2Q96NM4 488 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 BARD1Q99728 777 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 LGR4Q9BXB1 951 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 SMOC1Q9H4F8 434 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 ELAC1Q9H777 363 aaKnown RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 FAM204AQ9H8W3 233 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 DBNDD1Q9H9R9 158 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 TNFRSF12AQ9NP84 129 aa5.21□□□□□ -1.58
CD44-202ENST00000278385 BLMP54132 1417 aaPredicted RBP5.21□□□□□ -1.58
CD44-202ENST00000278385 ARHGEF28Q8N1W1 1705 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 AATKQ6ZMQ8 1374 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 KTN1Q86UP2 1357 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 TRIM64A6NGJ6 449 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TRIM64BA6NI03 449 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 NOTOA8MTQ0 251 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 B4E171 279 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 C22orf46C9J442 243 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA12O60330 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 FKBP9O95302 570 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 BAG2O95816 211 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TPM2P07951 284 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PABPC1P11940 636 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 GLDCP23378 1020 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 KIF5BP33176 963 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PPM1AP35813 382 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 ZNF132P52740 706 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 GABREP78334 506 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TMF1P82094 1093 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 LSAMPQ13449 338 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 SEMA5AQ13591 1074 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 MROH9Q5TGP6 573 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 PGM2L1Q6PCE3 622 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CPLX2Q6PUV4 134 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 ATG14Q6ZNE5 492 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 EP400NLQ6ZTU2 488 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 FKBP9P1Q75LS8 142 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CEP68Q76N32 757 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 DPP9Q86TI2 863 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 ARHGEF25Q86VW2 580 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TTC30AQ86WT1 665 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 OR2C3Q8N628 320 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TMEM145Q8NBT3 493 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 NPLOC4Q8TAT6 608 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 DCAF4Q8WV16 495 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 OSBP2Q969R2 916 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CENPTQ96BT3 561 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 TESK2Q96S53 571 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 IWS1Q96ST2 819 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 RMDN3Q96TC7 470 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 MAP3K14Q99558 947 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CHCHD6Q9BRQ6 235 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 ALG1Q9BT22 464 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 VPS11Q9H270 941 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 NFKBIL1Q9UBC1 381 aaPredicted RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CNOT6Q9ULM6 557 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA9Q9Y5G4 932 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms