RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM13CQ8NE31 585 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 TMEM109Q9BVC6 243 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 ZFATQ9P243 1243 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
COL8A1-202ENST00000273342 IGKV6D-41A0A0C4DH26 115 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 TMEM150BA6NC51 233 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 HSPA6P17066 643 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 ATP4AP20648 1035 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 NOVP48745 357 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 MXRA7P84157 204 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 FBXO11Q86XK2 927 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 EPS8L1Q8TE68 723 aa13.77□□□□□ -0.2
COL8A1-202ENST00000273342 CYP3A7-CYP3A51PA0A087WV96 503 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 BMP3P12645 472 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 KRT5P13647 590 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 CYP3A7P24462 503 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 GBP1P32455 592 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 MTFR1Q15390 333 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 KAZNQ674X7 775 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 CNKSR1Q969H4 720 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 SNF8Q96H20 258 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 NAP1L4Q99733 375 aaKnown RBP13.77□□□□□ -0.21
COL8A1-202ENST00000273342 TBC1D10AQ9BXI6 508 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 AMNQ9BXJ7 453 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 ATP5DP30049 168 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 VAMP7P51809 220 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 TMEM63BQ5T3F8 832 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 WDR18Q9BV38 432 aa13.77□□□□□ -0.21
COL8A1-202ENST00000273342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 GOLGA8SH3BPF8 625 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 GOLGA8MH3BSY2 632 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 PEX11AO75192 247 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 ZSCAN5DPP0CG00 497 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 NT5C2P49902 561 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 IL9RQ01113 521 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 STRN3Q13033 797 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 PLEKHO2Q8TD55 490 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 CPA5Q8WXQ8 436 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 CD101Q93033 1021 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 FIZ1Q96SL8 496 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 KLF6Q99612 283 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 PI4K2AQ9BTU6 479 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 CORO1CQ9ULV4 474 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 EXOC1LA0A1B0GW35 172 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 BANF1O75531 89 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 GAP43P17677 238 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 MAPK4P31152 587 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 FASTKD3Q14CZ7 662 aaKnown RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 RFWD3Q6PCD5 774 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 CCDC174Q6PII3 467 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 RAB3IPQ96QF0 476 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-202ENST00000273342 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 RNPEPL1Q9HAU8 725 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 NPHS2Q9NP85 383 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
COL8A1-202ENST00000273342 F5H6K3 240 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 GAS7O60861 476 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 RPS6KA4O75676 772 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 RALAP11233 206 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 CALB2P22676 271 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 CA4P22748 312 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-202ENST00000273342 PTDSS1P48651 473 aaKnown RBP13.75□□□□□ -0.21
COL8A1-202ENST00000273342 CETN1Q12798 172 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 RASA3Q14644 834 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 PKN2Q16513 984 aaKnown RBP13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SLF2Q8IX21 1173 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 UCMAQ8WVF2 138 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 HAUS1Q96CS2 278 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 HSD17B14Q9BPX1 270 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SYT15Q9BQS2 421 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SAYSD1Q9NPB0 183 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 FAM47DPA6NHR8 397 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 ETS1P14921 441 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 CD58P19256 250 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 ITIH2P19823 946 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 IVDP26440 423 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 INHBEP58166 350 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 FMO1Q01740 532 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 MUM1Q2TAK8 710 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 TAF1BQ53T94 588 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms