RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NELFCDQ8IXH7 590 aa14□□□□□ -0.17
NUP54-201ENST00000264883 SLC16A10Q8TF71 515 aa14□□□□□ -0.17
NUP54-201ENST00000264883 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 DHX36Q9H2U1 1008 aaKnown RBP14□□□□□ -0.17
NUP54-201ENST00000264883 STARD13Q9Y3M8 1113 aa14□□□□□ -0.17
NUP54-201ENST00000264883 ACSL3O95573 720 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 CYP11B2P19099 503 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 CHRNA3P32297 505 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 JAM2P57087 298 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 USP46P62068 366 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
NUP54-201ENST00000264883 SLFN12Q8IYM2 578 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 KCTD17Q8N5Z5 321 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 NR1H4Q96RI1 486 aaPredicted RBP13.99□□□□□ -0.17
NUP54-201ENST00000264883 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 DDX50Q9BQ39 737 aaKnown RBP13.99□□□□□ -0.17
NUP54-201ENST00000264883 TLE6Q9H808 572 aa13.99□□□□□ -0.17
NUP54-201ENST00000264883 METTL5Q9NRN9 209 aaKnown RBP13.99□□□□□ -0.17
NUP54-201ENST00000264883 CAPN9O14815 690 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 MAP3K7O43318 606 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 PFDN1O60925 122 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 LYNP07948 512 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 ZCCHC18P0CG32 403 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 HSPA6P17066 643 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 LMNB1P20700 586 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 PON1P27169 355 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 BTDP43251 543 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 AP1B1Q10567 949 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 RRP1BQ14684 758 aaKnown RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 ECM1Q16610 540 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 MOXD1Q6UVY6 613 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 ILDR2Q71H61 639 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 U2AF1L4Q8WU68 220 aaKnown RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 CENPKQ9BS16 269 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 CDC42EP4Q9H3Q1 356 aaKnown RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 OSGEPQ9NPF4 335 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 KRT36O76013 467 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 SH3BGRP55822 239 aaPredicted RBP13.98□□□□□ -0.17
NUP54-201ENST00000264883 IL9RQ01113 521 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 EPHA7Q15375 998 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 BMT2Q1RMZ1 405 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 PPP1R21Q6ZMI0 780 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 ART4Q93070 314 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 COA7Q96BR5 231 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 UBA5Q9GZZ9 404 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 MYO3BQ8WXR4 1341 aa13.98□□□□□ -0.17
NUP54-201ENST00000264883 TTLL1O95922 423 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 GALCP54803 685 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 INHBCP55103 352 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 CDR2Q01850 454 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 LIN52Q52LA3 116 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 STKLD1Q8NE28 680 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 SLC35G2Q8TBE7 412 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 RFFLQ8WZ73 363 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 ZNF184Q99676 751 aaPredicted RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 CCDC28BQ9BUN5 200 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 RHBDL2Q9NX52 303 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 MTMR4Q9NYA4 1195 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 PCYOX1Q9UHG3 505 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 PHTF1Q9UMS5 762 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 E9PMD0 336 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 PSMG1O95456 288 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 ETS2P15036 469 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 SLC9A1P19634 815 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 STAT1P42224 750 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 SLC12A3P55017 1021 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 RTP1P59025 263 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 BPIFB4P59827 614 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 ADCY1Q08828 1119 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 GRIK5Q16478 980 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 SH2D4BQ5SQS7 431 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 EPM2AIP1Q7L775 607 aaPredicted RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 LZICQ8WZA0 190 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 TYW1Q9NV66 732 aaKnown RBP13.97□□□□□ -0.17
NUP54-201ENST00000264883 LNPEPQ9UIQ6 1025 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
NUP54-201ENST00000264883 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.17
NUP54-201ENST00000264883 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
NUP54-201ENST00000264883 H0YIN7 160 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms