RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 ADAMTSL3P82987 1691 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 CCDC160A6NGH7 325 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 ASLP04424 464 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 VHLP40337 213 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 NEK2P51955 445 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 MTMR3Q13615 1198 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 FBXO25Q8TCJ0 367 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 ASAP3Q8TDY4 903 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 ECM29Q5VYK3 1845 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 NUP188Q5SRE5 1749 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 GSTTP1A0A1W2PQM5 241 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
SCARF1-201ENST00000263071 ARHGAP4P98171 946 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 BNIP1Q12981 228 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 ARSHQ5FYA8 562 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 FAM182AQ5T1J6 154 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 DENND2CQ68D51 928 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 SPATA24Q86W54 205 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 EPS8L3Q8TE67 593 aaKnown RBP15.08■□□□□ 0
SCARF1-201ENST00000263071 ERVK-5Q9HDB9 667 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 NMRK1Q9NWW6 199 aa15.08■□□□□ 0
SCARF1-201ENST00000263071 RABL2AQ9UBK7 228 aaPredicted RBP15.08■□□□□ 0
SCARF1-201ENST00000263071 BOLA2-SMG1P6H3BVE0 249 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 DDX3XO00571 662 aaKnown RBP eCLIP15.07■□□□□ 0
SCARF1-201ENST00000263071 ZBTB5O15062 677 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 PRLRP16471 622 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 HNRNPH3P31942 346 aaKnown RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 GALK1P51570 392 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 USP11P51784 963 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ZNF543Q08ER8 600 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 GRAPQ13588 217 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SLC29A2Q14542 456 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 C14orf80Q86SX3 495 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 CEP70Q8NHQ1 597 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 GRAPLQ8TC17 118 aaPredicted RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 PPP2R3CQ969Q6 453 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 NMD3Q96D46 503 aaKnown RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 HOMER2Q9NSB8 354 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 NARFQ9UHQ1 456 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 EFR3BQ9Y2G0 817 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 RABGAP1Q9Y3P9 1069 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 LRP6O75581 1613 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 LAMB4A4D0S4 1761 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 HLA-DOAP06340 250 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SPATA31D3P0C874 917 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 GCLMP48507 274 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SEPT7Q16181 437 aaKnown RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 CMPK2Q5EBM0 449 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ODR4Q5SWX8 454 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 DAB2IPQ5VWQ8 1189 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SPATA31D4Q6ZUB0 917 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 NEK9Q8TD19 979 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SLC20A1Q8WUM9 679 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SREK1Q8WXA9 508 aaKnown RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 ATP6V0A1Q93050 837 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 CLIP3Q96DZ5 547 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 PBKQ96KB5 322 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ZNF317Q96PQ6 595 aaPredicted RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 ISCUQ9H1K1 167 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 UBE2TQ9NPD8 197 aaPredicted RBP15.07■□□□□ 0
SCARF1-201ENST00000263071 CTNNAL1Q9UBT7 734 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 POLLQ9UGP5 575 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 IGSF9BQ9UPX0 1349 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 EDIL3O43854 480 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 PEX11AO75192 247 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ARPC4P59998 168 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SMUG1Q53HV7 270 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 DEPTORQ8TB45 409 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 ATP8B4Q8TF62 1192 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 CENPOQ9BU64 300 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 OSBPL10Q9BXB5 764 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 SYNPO2Q9UMS6 1093 aa15.07■□□□□ 0
SCARF1-201ENST00000263071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
SCARF1-201ENST00000263071 CALUO43852 315 aaPredicted RBP15.06■□□□□ 0
SCARF1-201ENST00000263071 IRF2BP2Q7Z5L9 587 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 PPM1KQ8N3J5 372 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 OLFM3Q96PB7 478 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 SEMA4AQ9H3S1 761 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 BTBD7Q9P203 1132 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 PJA2O43164 708 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 HPCAP84074 193 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 KPNB1Q14974 876 aaKnown RBP15.06■□□□□ 0
SCARF1-201ENST00000263071 LONRF1Q17RB8 773 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 LIN52Q52LA3 116 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 ASPRV1Q53RT3 343 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 HS2ST1Q7LGA3 356 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 STKLD1Q8NE28 680 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 C1orf54Q8WWF1 131 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 PWWP2AQ96N64 755 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 ASIC3Q9UHC3 531 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
SCARF1-201ENST00000263071 CYLC2Q14093 348 aaPredicted RBP15.05■□□□□ 0
SCARF1-201ENST00000263071 PHLDB3Q6NSJ2 640 aa15.05■□□□□ 0
SCARF1-201ENST00000263071 DUS1LQ6P1R4 473 aaKnown RBP15.05■□□□□ 0
SCARF1-201ENST00000263071 INTS8Q75QN2 995 aaKnown RBP15.05■□□□□ 0
SCARF1-201ENST00000263071 FAM178BQ8IXR5 827 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms