RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 MYLIPQ8WY64 445 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 SNX27Q96L92 541 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 GUCD1Q96NT3 240 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 COLEC11Q9BWP8 271 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 KIAA1586Q9HCI6 787 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 PLAGL2Q9UPG8 496 aa20.42■□□□□ 0.86
CYSTM1-201ENST00000261811 DDHD2O94830 711 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 GALTP07902 379 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 OR1G1P47890 313 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 PLCB3Q01970 1234 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 ZNF280BQ86YH2 543 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 COLGALT2Q8IYK4 626 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 GLIS3Q8NEA6 775 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 GSTCDQ8NEC7 633 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 UROC1Q96N76 676 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 HAPLN2Q9GZV7 340 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 MIOSQ9NXC5 875 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 CNTN3Q9P232 1028 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 LZTS1Q9Y250 596 aa20.41■□□□□ 0.86
CYSTM1-201ENST00000261811 SMIM28A0A1B0GU29 152 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 RFXAPO00287 272 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 KCNE1P15382 129 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 POU3F3P20264 500 aaPredicted RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 AFF1P51825 1210 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 DSC1Q08554 894 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 STIM1Q13586 685 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 SEZ6Q53EL9 994 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 XKR4Q5GH76 650 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 PDE12Q6L8Q7 609 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 ALKAL1Q6UXT8 129 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 SLC39A11Q8N1S5 342 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 GPD1LQ8N335 351 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 KIAA0895Q8NCT3 520 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 NOC3LQ8WTT2 800 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 PPP2R3CQ969Q6 453 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 MRPL38Q96DV4 380 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 FAM212AQ96EL1 285 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 ALG13Q9NP73 1137 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 HCSTQ9UBK5 93 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 DNAJB4Q9UDY4 337 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 CPSF3Q9UKF6 684 aaKnown RBP20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 PCDHA5Q9Y5H7 936 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 ATG2AQ2TAZ0 1938 aa20.4■□□□□ 0.86
CYSTM1-201ENST00000261811 EPOPA6NHQ4 379 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 TISP43B9A030 160 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 PTGESO14684 152 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 NRP1O14786 923 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 CALUO43852 315 aaPredicted RBP20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 EXTL3O43909 919 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 LPXNO60711 386 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 IL18RAPO95256 599 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 ITGB1P05556 798 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 CXCL8P10145 99 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 ADSSP30520 456 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 PPP1R2P41236 205 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 SLC11A1P49279 550 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 ACOT2P49753 483 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 SLC10A6Q3KNW5 377 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 ZNF658Q5TYW1 1059 aaPredicted RBP20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 GUF1Q8N442 669 aaKnown RBP20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 DDX27Q96GQ7 796 aaKnown RBP20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 FAM213AQ9BRX8 229 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 ASB7Q9H672 318 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 LMBRD1Q9NUN5 540 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 STXBP5LQ9Y2K9 1186 aa20.39■□□□□ 0.85
CYSTM1-201ENST00000261811 CHD7Q9P2D1 2997 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 TTC26A0AVF1 554 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 NT5C1B-RDH14C9J2C7 533 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 PDXKO00764 312 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 TNFSF9P41273 254 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 TIGD5Q53EQ6 642 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 GLRA4Q5JXX5 417 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 SPPL3Q8TCT6 385 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 MICAL1Q8TDZ2 1067 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 POF1BQ8WVV4 589 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 PCIF1Q9H4Z3 704 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 DERAQ9Y315 318 aa20.38■□□□□ 0.85
CYSTM1-201ENST00000261811 PRRC2BQ5JSZ5 2229 aaKnown RBP20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 FAM189A1O60320 539 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 HOXD13P35453 343 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 PBX3P40426 434 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 SURF1Q15526 300 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 ENOX2Q16206 610 aaKnown RBP20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 NT5DC4Q86YG4 428 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 C12orf56Q8IXR9 622 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 XXYLT1Q8NBI6 393 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 SAAL1Q96ER3 474 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 KIF12Q96FN5 646 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 CBWD1Q9BRT8 395 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 IKZF4Q9H2S9 585 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 TLR9Q9NR96 1032 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 HSPBP1Q9NZL4 362 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 UBQLN1Q9UMX0 589 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms