RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GCNT4Q9P109 453 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 PLAGL2Q9UPG8 496 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 SCN5AQ14524 2016 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 SOX1O00570 391 aaPredicted RBP18.93■□□□□ 0.62
SRSF1-201ENST00000258962 CHRNA1P02708 482 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 MYL7Q01449 175 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 PPP3CAQ08209 521 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 IKBKEQ14164 716 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 MBTPS1Q14703 1052 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 DNTTIP2Q5QJE6 756 aaKnown RBP18.93■□□□□ 0.62
SRSF1-201ENST00000258962 RASIP1Q5U651 963 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 KLHDC7AQ5VTJ3 777 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 NYAP1Q6ZVC0 841 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 RRAGAQ7L523 313 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 CACNA2D4Q7Z3S7 1137 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 ZBTB8OSQ8IWT0 167 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 SEPT8Q92599 483 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 ZNF668Q96K58 619 aaPredicted RBP18.93■□□□□ 0.62
SRSF1-201ENST00000258962 C16orf45Q96MC5 204 aaPredicted RBP18.93■□□□□ 0.62
SRSF1-201ENST00000258962 MFSD14AQ96MC6 490 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 C2orf40Q9H1Z8 148 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 CXXC1Q9P0U4 656 aaPredicted RBP18.93■□□□□ 0.62
SRSF1-201ENST00000258962 CDY2AQ9Y6F7 541 aa18.93■□□□□ 0.62
SRSF1-201ENST00000258962 ASAP2O43150 1006 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 BAIAP3O94812 1187 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 PRKCBP05771 671 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 CDK17Q00537 523 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 TMEM62Q0P6H9 643 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 TFDP1Q14186 410 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
SRSF1-201ENST00000258962 ZPBP2Q6X784 338 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 KIAA0319LQ8IZA0 1049 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 NLRP4Q96MN2 994 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 AJAP1Q9UKB5 411 aaPredicted RBP18.92■□□□□ 0.62
SRSF1-201ENST00000258962 FHOD1Q9Y613 1164 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 ADGRG1Q9Y653 693 aa18.92■□□□□ 0.62
SRSF1-201ENST00000258962 TANC1Q9C0D5 1861 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 EXTL3O43909 919 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 EFCAB14O75071 495 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 UCHL3P15374 230 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 PTENP60484 403 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 SMAD3P84022 425 aaKnown RBP18.91■□□□□ 0.62
SRSF1-201ENST00000258962 CYP24A1Q07973 514 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 TRIM65Q6PJ69 517 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 PARD3BQ8TEW8 1205 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 LRCH3Q96II8 777 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 MAP7D2Q96T17 732 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 FAM213AQ9BRX8 229 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
SRSF1-201ENST00000258962 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
SRSF1-201ENST00000258962 ZNHIT6Q9NWK9 470 aaKnown RBP18.91■□□□□ 0.62
SRSF1-201ENST00000258962 TRPV2Q9Y5S1 764 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
SRSF1-201ENST00000258962 A0A0B4J269 797 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 LRRIQ3A6PVS8 624 aaPredicted RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 KIAA0391O15091 583 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 NLRP11P59045 1033 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 MAPK6Q16659 721 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 PLEKHG4Q58EX7 1191 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 SLFN12LQ6IEE8 588 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 CRELD2Q6UXH1 353 aaPredicted RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 LMO3Q8TAP4 145 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 NFKBIZQ9BYH8 718 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 INTS2Q9H0H0 1204 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 FZD8Q9H461 694 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ARHGAP20Q9P2F6 1191 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ANKFY1Q9P2R3 1169 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 FBXL5Q9UKA1 691 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 AGO2Q9UKV8 859 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 AKT3Q9Y243 479 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ABLIM1O14639 778 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ZSCAN12O43309 604 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 N4BP1O75113 896 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 VTNP04004 478 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 TUBB4AP04350 444 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 PLEKP08567 350 aaPredicted RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 CCDC175P0C221 793 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 GHRP10912 638 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 GCLMP48507 274 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 POU5F1BQ06416 359 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ENPEPQ07075 957 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 MGAT3Q09327 533 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 GJB7Q6PEY0 223 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 IFNLR1Q8IU57 520 aaPredicted RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 GPIHBP1Q8IV16 184 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 USP38Q8NB14 1042 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ACRBPQ8NEB7 543 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 SYN2Q92777 582 aaPredicted RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 APBB2Q92870 758 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ACO2Q99798 780 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 MSTO1Q9BUK6 570 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms