RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 AIM2O14862 343 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ABCB5Q2M3G0 1257 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 GPATCH4Q5T3I0 446 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 ANKRD40Q6AI12 368 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 STK32BQ9NY57 414 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 V9GYQ6 96 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 DFFAO00273 331 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 S100A6P06703 90 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 CCDC130P13994 396 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 NME3Q13232 169 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 KPNB1Q14974 876 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 PEG10Q86TG7 708 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 ADAMTS1Q9UHI8 967 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 IPPQ9Y573 584 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 A0A1W2PRG6 482 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 F8W810 466 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 GSTM1P09488 218 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 S100A1P23297 94 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 RRM2P31350 389 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 AKT1P31749 480 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ZAP70P43403 619 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 MRPS25P82663 173 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 SMAD1Q15797 465 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 ZSWIM7Q19AV6 140 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 MTERF2Q49AM1 385 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ARMCX6Q7L4S7 300 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ZNF713Q8N859 430 aaPredicted RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 SHCBP1Q8NEM2 672 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 TSPAN17Q96FV3 270 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 SNF8Q96H20 258 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 PRMT1Q99873 361 aaKnown RBP9.1□□□□□ -0.95
USP6-201ENST00000250066 CDYLQ9Y232 598 aa9.1□□□□□ -0.95
USP6-201ENST00000250066 ABCC5O15440 1437 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 IKBKBO14920 756 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 MARK3P27448 753 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 CEP44Q9C0F1 390 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 DLGAP2Q9P1A6 1054 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 POLG2Q9UHN1 485 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 SH3GLB1Q9Y371 365 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP6-201ENST00000250066 HUS1O60921 280 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ECDO95905 644 aaPredicted RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 PRIM2P49643 509 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 HNMTP50135 292 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 LRRC63Q05C16 580 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ZNF699Q32M78 642 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 FBXO38Q6PIJ6 1188 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 C11orf96Q7Z7L8 435 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ZNF786Q8N393 782 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 FOXP1Q9H334 677 aaPredicted RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 SLC9A2Q9UBY0 812 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 TJP2Q9UDY2 1190 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 CNOT8Q9UFF9 292 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 OSBPP22059 807 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 CSNK2BP67870 215 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 GPC5P78333 572 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ASPRV1Q53RT3 343 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 TMEM35BQ8NCS4 154 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 UBASH3BQ8TF42 649 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 DNAJC9Q8WXX5 260 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ZNF518AQ6AHZ1 1483 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 KLHL2O95198 593 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 HSPA13P48723 471 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ACTR2P61160 394 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 MTFR1Q15390 333 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 TAB1Q15750 504 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 MFSD4BQ5TF39 518 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 SLFN13Q68D06 897 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 SDR42E1Q8WUS8 393 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 LBHD1Q9BQE6 289 aaPredicted RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 UBE2OQ9C0C9 1292 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 COPG2Q9UBF2 871 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 NDUFB9Q9Y6M9 179 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 FAM25AB3EWG3 89 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 FAM25CB3EWG5 89 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 FAM25GB3EWG6 89 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 NDUFS3O75489 264 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 LDHAP00338 332 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 ZNF394Q53GI3 561 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ULK3Q6PHR2 472 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 PPP1R16BQ96T49 567 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 DDX50Q9BQ39 737 aaKnown RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 IL1RL2Q9HB29 575 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 TRIM43BA6NCK2 446 aa9.09□□□□□ -0.95
USP6-201ENST00000250066 ZNF189O75820 626 aaPredicted RBP9.09□□□□□ -0.95
USP6-201ENST00000250066 PDE9AO76083 593 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms