RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 SUPT3HO75486 399 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 FXR2P51116 673 aaKnown RBP eCLIP10.09□□□□□ -0.793e-6■■□□□ 13.6
NUDCD1-201ENST00000239690 RPS6KA3P51812 740 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 SCUBE1Q8IWY4 988 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 ZNF513Q8N8E2 541 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 KIAA0895Q8NCT3 520 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 ZNF483Q8TF39 744 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 TSC22D4Q9Y3Q8 395 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 KDM6AO15550 1401 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 NPHP3-ACAD11A0A0J9YXS1 232 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 USP17L5A8MUK1 530 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 FANCGO15287 622 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 FKBP6O75344 327 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 CBX6O95503 412 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 CLPTM1O96005 669 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 HSPA8P11142 646 aaKnown RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 MYCLP12524 364 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 PON1P27169 355 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 AP3B2Q13367 1082 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 MTFR1Q15390 333 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 POTEAQ6S8J7 498 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 DDI1Q8WTU0 396 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 EZH1Q92800 747 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 FAF2Q96CS3 445 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 FAM20AQ96MK3 541 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 KLF6Q99612 283 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 MARCOQ9UEW3 520 aaPredicted RBP10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
NUDCD1-201ENST00000239690 SLIT1O75093 1534 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 BAZ2BQ9UIF8 2168 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 A8MXQ7 604 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 WFS1O76024 890 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SHBGP04278 402 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CSF1RP07333 972 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 KRT4P19013 534 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 MMP13P45452 471 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 RPL21P46778 160 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF268Q14587 947 aaPredicted RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TRADDQ15628 312 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TBC1D10BQ4KMP7 808 aaPredicted RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TEDDM1Q5T9Z0 273 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 RNF43Q68DV7 783 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 PRPF39Q86UA1 669 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 KCTD6Q8NC69 237 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SLC44A5Q8NCS7 719 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CCDC17Q96LX7 622 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 BTBD10Q9BSF8 475 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TBC1D10AQ9BXI6 508 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CCDC134Q9H6E4 229 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 ZNF212Q9UDV6 495 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TRIM33Q9UPN9 1127 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 KDM1AO60341 852 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 KLHL2O95198 593 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 FESP07332 822 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 KRT19P08727 400 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 PRDX5P30044 214 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SEC23AQ15436 765 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 NT5DC3Q86UY8 548 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 JDP2Q8WYK2 163 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CCT7Q99832 543 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 MRPL40Q9NQ50 206 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SAR1AQ9NR31 198 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 LZTS1Q9Y250 596 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 DTNAQ9Y4J8 743 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 TLR3O15455 904 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 PPIP5K2O43314 1243 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SAT1P21673 171 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 STX1BP61266 288 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CENPCQ03188 943 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 GRB10Q13322 594 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 GJB7Q6PEY0 223 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 MPP4Q96JB8 637 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 RPL26L1Q9UNX3 145 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-201ENST00000239690 CYP26A1O43174 497 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 ZBED1O96006 694 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 STX3Q13277 289 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 AUHQ13825 339 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 TBCCQ15814 346 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 IRF2BP1Q8IU81 584 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 SCFD2Q8WU76 684 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 MRPL11Q9Y3B7 192 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 JCADQ9P266 1359 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 ARHGEF28Q8N1W1 1705 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
NUDCD1-201ENST00000239690 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms